Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13929 | 42010;42011;42012 | chr2:178635539;178635538;178635537 | chr2:179500266;179500265;179500264 |
N2AB | 12288 | 37087;37088;37089 | chr2:178635539;178635538;178635537 | chr2:179500266;179500265;179500264 |
N2A | 11361 | 34306;34307;34308 | chr2:178635539;178635538;178635537 | chr2:179500266;179500265;179500264 |
N2B | 4864 | 14815;14816;14817 | chr2:178635539;178635538;178635537 | chr2:179500266;179500265;179500264 |
Novex-1 | 4989 | 15190;15191;15192 | chr2:178635539;178635538;178635537 | chr2:179500266;179500265;179500264 |
Novex-2 | 5056 | 15391;15392;15393 | chr2:178635539;178635538;178635537 | chr2:179500266;179500265;179500264 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.007 | N | 0.243 | 0.043 | 0.0551355673512 | gnomAD-4.0.0 | 1.63521E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.93708E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4902 | ambiguous | 0.6265 | pathogenic | -0.718 | Destabilizing | 0.004 | N | 0.261 | neutral | None | None | None | None | N |
H/C | 0.2438 | likely_benign | 0.3129 | benign | 0.118 | Stabilizing | 0.633 | D | 0.365 | neutral | None | None | None | None | N |
H/D | 0.5812 | likely_pathogenic | 0.6889 | pathogenic | -0.298 | Destabilizing | None | N | 0.16 | neutral | N | 0.444788607 | None | None | N |
H/E | 0.4778 | ambiguous | 0.6047 | pathogenic | -0.196 | Destabilizing | None | N | 0.063 | neutral | None | None | None | None | N |
H/F | 0.4571 | ambiguous | 0.5794 | pathogenic | 0.436 | Stabilizing | 0.01 | N | 0.479 | neutral | None | None | None | None | N |
H/G | 0.5881 | likely_pathogenic | 0.7121 | pathogenic | -1.093 | Destabilizing | 0.009 | N | 0.278 | neutral | None | None | None | None | N |
H/I | 0.395 | ambiguous | 0.5056 | ambiguous | 0.317 | Stabilizing | 0.021 | N | 0.511 | neutral | None | None | None | None | N |
H/K | 0.2084 | likely_benign | 0.2326 | benign | -0.369 | Destabilizing | None | N | 0.119 | neutral | None | None | None | None | N |
H/L | 0.2276 | likely_benign | 0.2886 | benign | 0.317 | Stabilizing | 0.003 | N | 0.348 | neutral | N | 0.439536258 | None | None | N |
H/M | 0.5865 | likely_pathogenic | 0.6876 | pathogenic | 0.171 | Stabilizing | 0.314 | N | 0.379 | neutral | None | None | None | None | N |
H/N | 0.218 | likely_benign | 0.3121 | benign | -0.446 | Destabilizing | None | N | 0.199 | neutral | N | 0.439292108 | None | None | N |
H/P | 0.8643 | likely_pathogenic | 0.9016 | pathogenic | -0.007 | Destabilizing | 0.031 | N | 0.459 | neutral | N | 0.447201085 | None | None | N |
H/Q | 0.2107 | likely_benign | 0.2921 | benign | -0.215 | Destabilizing | 0.007 | N | 0.243 | neutral | N | 0.443483213 | None | None | N |
H/R | 0.0851 | likely_benign | 0.0976 | benign | -0.835 | Destabilizing | None | N | 0.179 | neutral | N | 0.443682786 | None | None | N |
H/S | 0.423 | ambiguous | 0.563 | ambiguous | -0.541 | Destabilizing | 0.009 | N | 0.289 | neutral | None | None | None | None | N |
H/T | 0.3659 | ambiguous | 0.5144 | ambiguous | -0.329 | Destabilizing | 0.009 | N | 0.312 | neutral | None | None | None | None | N |
H/V | 0.3596 | ambiguous | 0.4788 | ambiguous | -0.007 | Destabilizing | 0.021 | N | 0.464 | neutral | None | None | None | None | N |
H/W | 0.5965 | likely_pathogenic | 0.6554 | pathogenic | 0.743 | Stabilizing | 0.362 | N | 0.365 | neutral | None | None | None | None | N |
H/Y | 0.1839 | likely_benign | 0.2587 | benign | 0.863 | Stabilizing | None | N | 0.173 | neutral | N | 0.448715659 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.