Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13942 | 42049;42050;42051 | chr2:178635500;178635499;178635498 | chr2:179500227;179500226;179500225 |
N2AB | 12301 | 37126;37127;37128 | chr2:178635500;178635499;178635498 | chr2:179500227;179500226;179500225 |
N2A | 11374 | 34345;34346;34347 | chr2:178635500;178635499;178635498 | chr2:179500227;179500226;179500225 |
N2B | 4877 | 14854;14855;14856 | chr2:178635500;178635499;178635498 | chr2:179500227;179500226;179500225 |
Novex-1 | 5002 | 15229;15230;15231 | chr2:178635500;178635499;178635498 | chr2:179500227;179500226;179500225 |
Novex-2 | 5069 | 15430;15431;15432 | chr2:178635500;178635499;178635498 | chr2:179500227;179500226;179500225 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs902514647 | -0.902 | None | N | 0.146 | 0.038 | 0.232513804876 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3397 | likely_benign | 0.2646 | benign | -0.903 | Destabilizing | 0.016 | N | 0.424 | neutral | None | None | None | None | N |
I/C | 0.8738 | likely_pathogenic | 0.7912 | pathogenic | -0.616 | Destabilizing | 0.685 | D | 0.468 | neutral | None | None | None | None | N |
I/D | 0.8714 | likely_pathogenic | 0.794 | pathogenic | -0.285 | Destabilizing | 0.366 | N | 0.626 | neutral | None | None | None | None | N |
I/E | 0.7009 | likely_pathogenic | 0.5895 | pathogenic | -0.358 | Destabilizing | 0.366 | N | 0.622 | neutral | None | None | None | None | N |
I/F | 0.5238 | ambiguous | 0.4328 | ambiguous | -0.784 | Destabilizing | 0.177 | N | 0.454 | neutral | N | 0.463619975 | None | None | N |
I/G | 0.8302 | likely_pathogenic | 0.7234 | pathogenic | -1.114 | Destabilizing | 0.366 | N | 0.609 | neutral | None | None | None | None | N |
I/H | 0.8952 | likely_pathogenic | 0.82 | pathogenic | -0.382 | Destabilizing | 0.869 | D | 0.593 | neutral | None | None | None | None | N |
I/K | 0.7498 | likely_pathogenic | 0.6185 | pathogenic | -0.526 | Destabilizing | 0.366 | N | 0.603 | neutral | None | None | None | None | N |
I/L | 0.2321 | likely_benign | 0.183 | benign | -0.451 | Destabilizing | None | N | 0.139 | neutral | N | 0.461013633 | None | None | N |
I/M | 0.1792 | likely_benign | 0.1434 | benign | -0.383 | Destabilizing | 0.177 | N | 0.508 | neutral | N | 0.466495205 | None | None | N |
I/N | 0.5555 | ambiguous | 0.4041 | ambiguous | -0.295 | Destabilizing | 0.57 | D | 0.595 | neutral | N | 0.444392523 | None | None | N |
I/P | 0.9485 | likely_pathogenic | 0.9055 | pathogenic | -0.568 | Destabilizing | 0.637 | D | 0.611 | neutral | None | None | None | None | N |
I/Q | 0.7326 | likely_pathogenic | 0.6051 | pathogenic | -0.514 | Destabilizing | 0.637 | D | 0.597 | neutral | None | None | None | None | N |
I/R | 0.7014 | likely_pathogenic | 0.5821 | pathogenic | 0.05 | Stabilizing | 0.366 | N | 0.599 | neutral | None | None | None | None | N |
I/S | 0.4412 | ambiguous | 0.3171 | benign | -0.801 | Destabilizing | 0.177 | N | 0.562 | neutral | N | 0.433461951 | None | None | N |
I/T | 0.1793 | likely_benign | 0.1457 | benign | -0.762 | Destabilizing | 0.03 | N | 0.434 | neutral | N | 0.45858578 | None | None | N |
I/V | 0.0836 | likely_benign | 0.0765 | benign | -0.568 | Destabilizing | None | N | 0.146 | neutral | N | 0.429053499 | None | None | N |
I/W | 0.9689 | likely_pathogenic | 0.9516 | pathogenic | -0.812 | Destabilizing | 0.869 | D | 0.632 | neutral | None | None | None | None | N |
I/Y | 0.8701 | likely_pathogenic | 0.8014 | pathogenic | -0.567 | Destabilizing | 0.366 | N | 0.517 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.