Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13946 | 42061;42062;42063 | chr2:178635488;178635487;178635486 | chr2:179500215;179500214;179500213 |
N2AB | 12305 | 37138;37139;37140 | chr2:178635488;178635487;178635486 | chr2:179500215;179500214;179500213 |
N2A | 11378 | 34357;34358;34359 | chr2:178635488;178635487;178635486 | chr2:179500215;179500214;179500213 |
N2B | 4881 | 14866;14867;14868 | chr2:178635488;178635487;178635486 | chr2:179500215;179500214;179500213 |
Novex-1 | 5006 | 15241;15242;15243 | chr2:178635488;178635487;178635486 | chr2:179500215;179500214;179500213 |
Novex-2 | 5073 | 15442;15443;15444 | chr2:178635488;178635487;178635486 | chr2:179500215;179500214;179500213 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.028 | N | 0.37 | 0.085 | 0.0954503805726 | gnomAD-4.0.0 | 6.88053E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6645E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7362 | likely_pathogenic | 0.6192 | pathogenic | -0.664 | Destabilizing | 0.996 | D | 0.701 | prob.delet. | None | None | None | None | N |
A/D | 0.9727 | likely_pathogenic | 0.9288 | pathogenic | -2.34 | Highly Destabilizing | 0.909 | D | 0.736 | deleterious | None | None | None | None | N |
A/E | 0.954 | likely_pathogenic | 0.8766 | pathogenic | -2.045 | Highly Destabilizing | 0.883 | D | 0.735 | deleterious | N | 0.428274213 | None | None | N |
A/F | 0.883 | likely_pathogenic | 0.7541 | pathogenic | -0.575 | Destabilizing | 0.953 | D | 0.782 | deleterious | None | None | None | None | N |
A/G | 0.4343 | ambiguous | 0.3538 | ambiguous | -1.707 | Destabilizing | 0.518 | D | 0.591 | neutral | N | 0.432051466 | None | None | N |
A/H | 0.9603 | likely_pathogenic | 0.8977 | pathogenic | -2.09 | Highly Destabilizing | 0.987 | D | 0.753 | deleterious | None | None | None | None | N |
A/I | 0.886 | likely_pathogenic | 0.7033 | pathogenic | 0.245 | Stabilizing | 0.909 | D | 0.753 | deleterious | None | None | None | None | N |
A/K | 0.9942 | likely_pathogenic | 0.9802 | pathogenic | -0.913 | Destabilizing | 0.833 | D | 0.739 | deleterious | None | None | None | None | N |
A/L | 0.8144 | likely_pathogenic | 0.6432 | pathogenic | 0.245 | Stabilizing | 0.74 | D | 0.707 | prob.delet. | None | None | None | None | N |
A/M | 0.7803 | likely_pathogenic | 0.5808 | pathogenic | -0.274 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/N | 0.9306 | likely_pathogenic | 0.8236 | pathogenic | -1.618 | Destabilizing | 0.833 | D | 0.757 | deleterious | None | None | None | None | N |
A/P | 0.9975 | likely_pathogenic | 0.9965 | pathogenic | -0.208 | Destabilizing | 0.938 | D | 0.747 | deleterious | N | 0.432051466 | None | None | N |
A/Q | 0.9306 | likely_pathogenic | 0.8351 | pathogenic | -1.18 | Destabilizing | 0.909 | D | 0.741 | deleterious | None | None | None | None | N |
A/R | 0.9767 | likely_pathogenic | 0.9407 | pathogenic | -1.414 | Destabilizing | 0.909 | D | 0.755 | deleterious | None | None | None | None | N |
A/S | 0.2099 | likely_benign | 0.1449 | benign | -1.82 | Destabilizing | 0.028 | N | 0.319 | neutral | N | 0.421728481 | None | None | N |
A/T | 0.4645 | ambiguous | 0.2357 | benign | -1.39 | Destabilizing | 0.028 | N | 0.37 | neutral | N | 0.437903525 | None | None | N |
A/V | 0.6775 | likely_pathogenic | 0.4324 | ambiguous | -0.208 | Destabilizing | 0.682 | D | 0.658 | prob.neutral | N | 0.42524209 | None | None | N |
A/W | 0.9859 | likely_pathogenic | 0.9657 | pathogenic | -1.193 | Destabilizing | 0.996 | D | 0.697 | prob.delet. | None | None | None | None | N |
A/Y | 0.9506 | likely_pathogenic | 0.8765 | pathogenic | -0.819 | Destabilizing | 0.984 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.