Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13976 | 42151;42152;42153 | chr2:178635263;178635262;178635261 | chr2:179499990;179499989;179499988 |
N2AB | 12335 | 37228;37229;37230 | chr2:178635263;178635262;178635261 | chr2:179499990;179499989;179499988 |
N2A | 11408 | 34447;34448;34449 | chr2:178635263;178635262;178635261 | chr2:179499990;179499989;179499988 |
N2B | 4911 | 14956;14957;14958 | chr2:178635263;178635262;178635261 | chr2:179499990;179499989;179499988 |
Novex-1 | 5036 | 15331;15332;15333 | chr2:178635263;178635262;178635261 | chr2:179499990;179499989;179499988 |
Novex-2 | 5103 | 15532;15533;15534 | chr2:178635263;178635262;178635261 | chr2:179499990;179499989;179499988 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs773772232 | -0.849 | 0.041 | N | 0.382 | 0.048 | 0.201204373187 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/L | rs773772232 | -0.849 | 0.041 | N | 0.382 | 0.048 | 0.201204373187 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85997E-06 | 0 | 0 |
I/N | None | None | 0.911 | N | 0.821 | 0.311 | 0.610288044756 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8248 | likely_pathogenic | 0.7902 | pathogenic | -2.295 | Highly Destabilizing | 0.115 | N | 0.623 | neutral | None | None | None | None | N |
I/C | 0.9557 | likely_pathogenic | 0.9242 | pathogenic | -1.555 | Destabilizing | 0.944 | D | 0.725 | deleterious | None | None | None | None | N |
I/D | 0.9963 | likely_pathogenic | 0.9939 | pathogenic | -2.144 | Highly Destabilizing | 0.817 | D | 0.835 | deleterious | None | None | None | None | N |
I/E | 0.9883 | likely_pathogenic | 0.982 | pathogenic | -1.98 | Destabilizing | 0.817 | D | 0.789 | deleterious | None | None | None | None | N |
I/F | 0.905 | likely_pathogenic | 0.8571 | pathogenic | -1.347 | Destabilizing | 0.624 | D | 0.716 | prob.delet. | N | 0.437668413 | None | None | N |
I/G | 0.9851 | likely_pathogenic | 0.9757 | pathogenic | -2.785 | Highly Destabilizing | 0.817 | D | 0.747 | deleterious | None | None | None | None | N |
I/H | 0.9927 | likely_pathogenic | 0.9869 | pathogenic | -2.119 | Highly Destabilizing | 0.981 | D | 0.807 | deleterious | None | None | None | None | N |
I/K | 0.9783 | likely_pathogenic | 0.9617 | pathogenic | -1.626 | Destabilizing | 0.817 | D | 0.791 | deleterious | None | None | None | None | N |
I/L | 0.4576 | ambiguous | 0.4225 | ambiguous | -0.917 | Destabilizing | 0.041 | N | 0.382 | neutral | N | 0.409765984 | None | None | N |
I/M | 0.609 | likely_pathogenic | 0.5107 | ambiguous | -0.871 | Destabilizing | 0.624 | D | 0.713 | prob.delet. | N | 0.438880823 | None | None | N |
I/N | 0.9653 | likely_pathogenic | 0.9467 | pathogenic | -1.759 | Destabilizing | 0.911 | D | 0.821 | deleterious | N | 0.439092943 | None | None | N |
I/P | 0.9951 | likely_pathogenic | 0.9917 | pathogenic | -1.353 | Destabilizing | 0.931 | D | 0.833 | deleterious | None | None | None | None | N |
I/Q | 0.9828 | likely_pathogenic | 0.9713 | pathogenic | -1.72 | Destabilizing | 0.931 | D | 0.824 | deleterious | None | None | None | None | N |
I/R | 0.9607 | likely_pathogenic | 0.9382 | pathogenic | -1.267 | Destabilizing | 0.817 | D | 0.821 | deleterious | None | None | None | None | N |
I/S | 0.9301 | likely_pathogenic | 0.8934 | pathogenic | -2.492 | Highly Destabilizing | 0.624 | D | 0.74 | deleterious | N | 0.437668413 | None | None | N |
I/T | 0.799 | likely_pathogenic | 0.7068 | pathogenic | -2.192 | Highly Destabilizing | 0.321 | N | 0.675 | prob.neutral | N | 0.432695276 | None | None | N |
I/V | 0.0936 | likely_benign | 0.0756 | benign | -1.353 | Destabilizing | None | N | 0.125 | neutral | N | 0.304934168 | None | None | N |
I/W | 0.998 | likely_pathogenic | 0.9958 | pathogenic | -1.632 | Destabilizing | 0.981 | D | 0.785 | deleterious | None | None | None | None | N |
I/Y | 0.9879 | likely_pathogenic | 0.979 | pathogenic | -1.356 | Destabilizing | 0.817 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.