Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13977 | 42154;42155;42156 | chr2:178635260;178635259;178635258 | chr2:179499987;179499986;179499985 |
N2AB | 12336 | 37231;37232;37233 | chr2:178635260;178635259;178635258 | chr2:179499987;179499986;179499985 |
N2A | 11409 | 34450;34451;34452 | chr2:178635260;178635259;178635258 | chr2:179499987;179499986;179499985 |
N2B | 4912 | 14959;14960;14961 | chr2:178635260;178635259;178635258 | chr2:179499987;179499986;179499985 |
Novex-1 | 5037 | 15334;15335;15336 | chr2:178635260;178635259;178635258 | chr2:179499987;179499986;179499985 |
Novex-2 | 5104 | 15535;15536;15537 | chr2:178635260;178635259;178635258 | chr2:179499987;179499986;179499985 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | None | None | 0.016 | N | 0.338 | 0.095 | 0.200317383148 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8012 | likely_pathogenic | 0.7756 | pathogenic | -1.281 | Destabilizing | 0.745 | D | 0.374 | neutral | None | None | None | None | N |
Y/C | 0.5116 | ambiguous | 0.4672 | ambiguous | -0.182 | Destabilizing | 0.998 | D | 0.273 | neutral | N | 0.434819419 | None | None | N |
Y/D | 0.78 | likely_pathogenic | 0.7752 | pathogenic | 0.191 | Stabilizing | 0.974 | D | 0.441 | neutral | N | 0.433512679 | None | None | N |
Y/E | 0.9256 | likely_pathogenic | 0.9 | pathogenic | 0.206 | Stabilizing | 0.935 | D | 0.379 | neutral | None | None | None | None | N |
Y/F | 0.1527 | likely_benign | 0.1421 | benign | -0.561 | Destabilizing | 0.016 | N | 0.338 | neutral | N | 0.433630747 | None | None | N |
Y/G | 0.785 | likely_pathogenic | 0.7729 | pathogenic | -1.52 | Destabilizing | 0.935 | D | 0.433 | neutral | None | None | None | None | N |
Y/H | 0.5969 | likely_pathogenic | 0.5245 | ambiguous | -0.201 | Destabilizing | 0.991 | D | 0.293 | neutral | N | 0.434731397 | None | None | N |
Y/I | 0.7875 | likely_pathogenic | 0.759 | pathogenic | -0.622 | Destabilizing | 0.594 | D | 0.358 | neutral | None | None | None | None | N |
Y/K | 0.9214 | likely_pathogenic | 0.9026 | pathogenic | -0.376 | Destabilizing | 0.935 | D | 0.403 | neutral | None | None | None | None | N |
Y/L | 0.6528 | likely_pathogenic | 0.6538 | pathogenic | -0.622 | Destabilizing | 0.594 | D | 0.366 | neutral | None | None | None | None | N |
Y/M | 0.831 | likely_pathogenic | 0.8206 | pathogenic | -0.413 | Destabilizing | 0.981 | D | 0.285 | neutral | None | None | None | None | N |
Y/N | 0.554 | ambiguous | 0.5186 | ambiguous | -0.618 | Destabilizing | 0.974 | D | 0.423 | neutral | N | 0.433832052 | None | None | N |
Y/P | 0.878 | likely_pathogenic | 0.851 | pathogenic | -0.827 | Destabilizing | 0.994 | D | 0.436 | neutral | None | None | None | None | N |
Y/Q | 0.8942 | likely_pathogenic | 0.8626 | pathogenic | -0.57 | Destabilizing | 0.994 | D | 0.355 | neutral | None | None | None | None | N |
Y/R | 0.8096 | likely_pathogenic | 0.7707 | pathogenic | -0.02 | Destabilizing | 0.981 | D | 0.397 | neutral | None | None | None | None | N |
Y/S | 0.5529 | ambiguous | 0.5358 | ambiguous | -1.024 | Destabilizing | 0.728 | D | 0.327 | neutral | N | 0.428644222 | None | None | N |
Y/T | 0.7216 | likely_pathogenic | 0.7318 | pathogenic | -0.921 | Destabilizing | 0.087 | N | 0.265 | neutral | None | None | None | None | N |
Y/V | 0.624 | likely_pathogenic | 0.5862 | pathogenic | -0.827 | Destabilizing | 0.038 | N | 0.149 | neutral | None | None | None | None | N |
Y/W | 0.6335 | likely_pathogenic | 0.5925 | pathogenic | -0.492 | Destabilizing | 0.994 | D | 0.29 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.