Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13986 | 42181;42182;42183 | chr2:178635233;178635232;178635231 | chr2:179499960;179499959;179499958 |
N2AB | 12345 | 37258;37259;37260 | chr2:178635233;178635232;178635231 | chr2:179499960;179499959;179499958 |
N2A | 11418 | 34477;34478;34479 | chr2:178635233;178635232;178635231 | chr2:179499960;179499959;179499958 |
N2B | 4921 | 14986;14987;14988 | chr2:178635233;178635232;178635231 | chr2:179499960;179499959;179499958 |
Novex-1 | 5046 | 15361;15362;15363 | chr2:178635233;178635232;178635231 | chr2:179499960;179499959;179499958 |
Novex-2 | 5113 | 15562;15563;15564 | chr2:178635233;178635232;178635231 | chr2:179499960;179499959;179499958 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.361 | N | 0.655 | 0.138 | 0.101711395817 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43324E-05 | 0 |
A/T | rs1208784748 | None | 0.001 | N | 0.249 | 0.198 | 0.0611884634855 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5016 | ambiguous | 0.328 | benign | -1.105 | Destabilizing | 0.005 | N | 0.489 | neutral | None | None | None | None | N |
A/D | 0.9938 | likely_pathogenic | 0.9869 | pathogenic | -2.571 | Highly Destabilizing | 0.428 | N | 0.739 | deleterious | None | None | None | None | N |
A/E | 0.9887 | likely_pathogenic | 0.978 | pathogenic | -2.289 | Highly Destabilizing | 0.361 | N | 0.793 | deleterious | N | 0.439508754 | None | None | N |
A/F | 0.973 | likely_pathogenic | 0.9423 | pathogenic | -0.748 | Destabilizing | 0.842 | D | 0.787 | deleterious | None | None | None | None | N |
A/G | 0.556 | ambiguous | 0.4395 | ambiguous | -2.005 | Highly Destabilizing | 0.361 | N | 0.655 | prob.neutral | N | 0.439092943 | None | None | N |
A/H | 0.9938 | likely_pathogenic | 0.9868 | pathogenic | -2.316 | Highly Destabilizing | 0.984 | D | 0.749 | deleterious | None | None | None | None | N |
A/I | 0.8465 | likely_pathogenic | 0.6664 | pathogenic | -0.112 | Destabilizing | 0.272 | N | 0.801 | deleterious | None | None | None | None | N |
A/K | 0.9979 | likely_pathogenic | 0.9957 | pathogenic | -1.226 | Destabilizing | 0.428 | N | 0.785 | deleterious | None | None | None | None | N |
A/L | 0.7534 | likely_pathogenic | 0.5926 | pathogenic | -0.112 | Destabilizing | 0.134 | N | 0.672 | prob.neutral | None | None | None | None | N |
A/M | 0.8355 | likely_pathogenic | 0.6802 | pathogenic | -0.558 | Destabilizing | 0.842 | D | 0.763 | deleterious | None | None | None | None | N |
A/N | 0.9793 | likely_pathogenic | 0.9485 | pathogenic | -1.801 | Destabilizing | 0.724 | D | 0.763 | deleterious | None | None | None | None | N |
A/P | 0.9975 | likely_pathogenic | 0.9946 | pathogenic | -0.55 | Destabilizing | 0.8 | D | 0.803 | deleterious | N | 0.439092943 | None | None | N |
A/Q | 0.9849 | likely_pathogenic | 0.9698 | pathogenic | -1.42 | Destabilizing | 0.842 | D | 0.804 | deleterious | None | None | None | None | N |
A/R | 0.9924 | likely_pathogenic | 0.9863 | pathogenic | -1.537 | Destabilizing | 0.842 | D | 0.801 | deleterious | None | None | None | None | N |
A/S | 0.3968 | ambiguous | 0.2551 | benign | -2.104 | Highly Destabilizing | 0.104 | N | 0.594 | neutral | N | 0.438880823 | None | None | N |
A/T | 0.3443 | ambiguous | 0.163 | benign | -1.701 | Destabilizing | 0.001 | N | 0.249 | neutral | N | 0.339582731 | None | None | N |
A/V | 0.499 | ambiguous | 0.2786 | benign | -0.55 | Destabilizing | 0.008 | N | 0.307 | neutral | N | 0.403615201 | None | None | N |
A/W | 0.9982 | likely_pathogenic | 0.9952 | pathogenic | -1.457 | Destabilizing | 0.984 | D | 0.805 | deleterious | None | None | None | None | N |
A/Y | 0.9913 | likely_pathogenic | 0.9808 | pathogenic | -1.077 | Destabilizing | 0.942 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.