Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13993 | 42202;42203;42204 | chr2:178635212;178635211;178635210 | chr2:179499939;179499938;179499937 |
N2AB | 12352 | 37279;37280;37281 | chr2:178635212;178635211;178635210 | chr2:179499939;179499938;179499937 |
N2A | 11425 | 34498;34499;34500 | chr2:178635212;178635211;178635210 | chr2:179499939;179499938;179499937 |
N2B | 4928 | 15007;15008;15009 | chr2:178635212;178635211;178635210 | chr2:179499939;179499938;179499937 |
Novex-1 | 5053 | 15382;15383;15384 | chr2:178635212;178635211;178635210 | chr2:179499939;179499938;179499937 |
Novex-2 | 5120 | 15583;15584;15585 | chr2:178635212;178635211;178635210 | chr2:179499939;179499938;179499937 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs978359923 | None | None | N | 0.154 | 0.086 | 0.117506650769 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.882 | likely_pathogenic | 0.8002 | pathogenic | -1.353 | Destabilizing | 0.034 | N | 0.471 | neutral | None | None | None | None | N |
I/C | 0.9266 | likely_pathogenic | 0.8973 | pathogenic | -0.869 | Destabilizing | 0.823 | D | 0.629 | neutral | None | None | None | None | N |
I/D | 0.9848 | likely_pathogenic | 0.9743 | pathogenic | -0.888 | Destabilizing | 0.552 | D | 0.762 | deleterious | None | None | None | None | N |
I/E | 0.9571 | likely_pathogenic | 0.9292 | pathogenic | -0.901 | Destabilizing | 0.552 | D | 0.701 | prob.delet. | None | None | None | None | N |
I/F | 0.6046 | likely_pathogenic | 0.4855 | ambiguous | -0.958 | Destabilizing | 0.314 | N | 0.539 | neutral | N | 0.454047766 | None | None | N |
I/G | 0.9811 | likely_pathogenic | 0.9616 | pathogenic | -1.642 | Destabilizing | 0.552 | D | 0.619 | neutral | None | None | None | None | N |
I/H | 0.9608 | likely_pathogenic | 0.9295 | pathogenic | -0.792 | Destabilizing | 0.934 | D | 0.769 | deleterious | None | None | None | None | N |
I/K | 0.9512 | likely_pathogenic | 0.9135 | pathogenic | -0.962 | Destabilizing | 0.552 | D | 0.701 | prob.delet. | None | None | None | None | N |
I/L | 0.3734 | ambiguous | 0.2788 | benign | -0.648 | Destabilizing | 0.012 | N | 0.279 | neutral | N | 0.422052624 | None | None | N |
I/M | 0.4368 | ambiguous | 0.311 | benign | -0.592 | Destabilizing | 0.314 | N | 0.552 | neutral | N | 0.454293924 | None | None | N |
I/N | 0.8691 | likely_pathogenic | 0.7721 | pathogenic | -0.791 | Destabilizing | 0.739 | D | 0.769 | deleterious | N | 0.45518166 | None | None | N |
I/P | 0.9827 | likely_pathogenic | 0.9797 | pathogenic | -0.851 | Destabilizing | 0.789 | D | 0.759 | deleterious | None | None | None | None | N |
I/Q | 0.9486 | likely_pathogenic | 0.9029 | pathogenic | -0.96 | Destabilizing | 0.789 | D | 0.786 | deleterious | None | None | None | None | N |
I/R | 0.9341 | likely_pathogenic | 0.8895 | pathogenic | -0.36 | Destabilizing | 0.552 | D | 0.775 | deleterious | None | None | None | None | N |
I/S | 0.8794 | likely_pathogenic | 0.7832 | pathogenic | -1.329 | Destabilizing | 0.314 | N | 0.59 | neutral | N | 0.453458516 | None | None | N |
I/T | 0.7112 | likely_pathogenic | 0.5807 | pathogenic | -1.22 | Destabilizing | 0.061 | N | 0.537 | neutral | N | 0.424970439 | None | None | N |
I/V | 0.09 | likely_benign | 0.0825 | benign | -0.851 | Destabilizing | None | N | 0.154 | neutral | N | 0.411711599 | None | None | N |
I/W | 0.9884 | likely_pathogenic | 0.9792 | pathogenic | -1.011 | Destabilizing | 0.934 | D | 0.765 | deleterious | None | None | None | None | N |
I/Y | 0.9124 | likely_pathogenic | 0.8577 | pathogenic | -0.789 | Destabilizing | 0.552 | D | 0.631 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.