Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14006 | 42241;42242;42243 | chr2:178635173;178635172;178635171 | chr2:179499900;179499899;179499898 |
N2AB | 12365 | 37318;37319;37320 | chr2:178635173;178635172;178635171 | chr2:179499900;179499899;179499898 |
N2A | 11438 | 34537;34538;34539 | chr2:178635173;178635172;178635171 | chr2:179499900;179499899;179499898 |
N2B | 4941 | 15046;15047;15048 | chr2:178635173;178635172;178635171 | chr2:179499900;179499899;179499898 |
Novex-1 | 5066 | 15421;15422;15423 | chr2:178635173;178635172;178635171 | chr2:179499900;179499899;179499898 |
Novex-2 | 5133 | 15622;15623;15624 | chr2:178635173;178635172;178635171 | chr2:179499900;179499899;179499898 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.919 | N | 0.62 | 0.212 | 0.299086750705 | gnomAD-4.0.0 | 3.60099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93752E-06 | 0 | 0 |
P/S | None | None | 0.919 | N | 0.412 | 0.196 | 0.204665344411 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3214 | likely_benign | 0.1607 | benign | -0.397 | Destabilizing | 0.824 | D | 0.431 | neutral | N | 0.43630534 | None | None | N |
P/C | 0.9663 | likely_pathogenic | 0.9137 | pathogenic | -0.581 | Destabilizing | 0.999 | D | 0.728 | deleterious | None | None | None | None | N |
P/D | 0.8802 | likely_pathogenic | 0.7424 | pathogenic | -0.434 | Destabilizing | 0.938 | D | 0.482 | neutral | None | None | None | None | N |
P/E | 0.7336 | likely_pathogenic | 0.5494 | ambiguous | -0.555 | Destabilizing | 0.883 | D | 0.413 | neutral | None | None | None | None | N |
P/F | 0.9665 | likely_pathogenic | 0.8913 | pathogenic | -0.712 | Destabilizing | 0.997 | D | 0.699 | prob.delet. | None | None | None | None | N |
P/G | 0.846 | likely_pathogenic | 0.6337 | pathogenic | -0.505 | Destabilizing | 0.968 | D | 0.527 | neutral | None | None | None | None | N |
P/H | 0.7764 | likely_pathogenic | 0.54 | ambiguous | -0.138 | Destabilizing | 0.988 | D | 0.634 | neutral | N | 0.45416098 | None | None | N |
P/I | 0.903 | likely_pathogenic | 0.7557 | pathogenic | -0.261 | Destabilizing | 0.997 | D | 0.716 | prob.delet. | None | None | None | None | N |
P/K | 0.8804 | likely_pathogenic | 0.7364 | pathogenic | -0.439 | Destabilizing | 0.757 | D | 0.429 | neutral | None | None | None | None | N |
P/L | 0.656 | likely_pathogenic | 0.4023 | ambiguous | -0.261 | Destabilizing | 0.919 | D | 0.62 | neutral | N | 0.449870206 | None | None | N |
P/M | 0.8974 | likely_pathogenic | 0.7292 | pathogenic | -0.372 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
P/N | 0.835 | likely_pathogenic | 0.6127 | pathogenic | -0.148 | Destabilizing | 0.991 | D | 0.53 | neutral | None | None | None | None | N |
P/Q | 0.6396 | likely_pathogenic | 0.3818 | ambiguous | -0.4 | Destabilizing | 0.576 | D | 0.287 | neutral | None | None | None | None | N |
P/R | 0.7457 | likely_pathogenic | 0.5402 | ambiguous | 0.074 | Stabilizing | 0.034 | N | 0.552 | neutral | N | 0.431450516 | None | None | N |
P/S | 0.6076 | likely_pathogenic | 0.3098 | benign | -0.448 | Destabilizing | 0.919 | D | 0.412 | neutral | N | 0.435009496 | None | None | N |
P/T | 0.6506 | likely_pathogenic | 0.3535 | ambiguous | -0.474 | Destabilizing | 0.958 | D | 0.51 | neutral | N | 0.437047554 | None | None | N |
P/V | 0.7882 | likely_pathogenic | 0.5643 | pathogenic | -0.273 | Destabilizing | 0.991 | D | 0.547 | neutral | None | None | None | None | N |
P/W | 0.9845 | likely_pathogenic | 0.9503 | pathogenic | -0.799 | Destabilizing | 0.999 | D | 0.706 | prob.delet. | None | None | None | None | N |
P/Y | 0.9422 | likely_pathogenic | 0.8341 | pathogenic | -0.5 | Destabilizing | 0.997 | D | 0.727 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.