Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14011 | 42256;42257;42258 | chr2:178634843;178634842;178634841 | chr2:179499570;179499569;179499568 |
N2AB | 12370 | 37333;37334;37335 | chr2:178634843;178634842;178634841 | chr2:179499570;179499569;179499568 |
N2A | 11443 | 34552;34553;34554 | chr2:178634843;178634842;178634841 | chr2:179499570;179499569;179499568 |
N2B | 4946 | 15061;15062;15063 | chr2:178634843;178634842;178634841 | chr2:179499570;179499569;179499568 |
Novex-1 | 5071 | 15436;15437;15438 | chr2:178634843;178634842;178634841 | chr2:179499570;179499569;179499568 |
Novex-2 | 5138 | 15637;15638;15639 | chr2:178634843;178634842;178634841 | chr2:179499570;179499569;179499568 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.115 | N | 0.478 | 0.159 | 0.151104730317 | gnomAD-4.0.0 | 1.60873E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78474E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7115 | likely_pathogenic | 0.5702 | pathogenic | -0.73 | Destabilizing | 0.115 | N | 0.495 | neutral | N | 0.470307632 | None | None | N |
E/C | 0.9916 | likely_pathogenic | 0.9851 | pathogenic | -0.315 | Destabilizing | 0.934 | D | 0.807 | deleterious | None | None | None | None | N |
E/D | 0.2918 | likely_benign | 0.2839 | benign | -1.04 | Destabilizing | None | N | 0.153 | neutral | N | 0.431336527 | None | None | N |
E/F | 0.9826 | likely_pathogenic | 0.9623 | pathogenic | -0.524 | Destabilizing | 0.789 | D | 0.787 | deleterious | None | None | None | None | N |
E/G | 0.8699 | likely_pathogenic | 0.7262 | pathogenic | -1.052 | Destabilizing | 0.115 | N | 0.608 | neutral | N | 0.472079038 | None | None | N |
E/H | 0.9355 | likely_pathogenic | 0.867 | pathogenic | -0.892 | Destabilizing | 0.552 | D | 0.484 | neutral | None | None | None | None | N |
E/I | 0.8484 | likely_pathogenic | 0.7521 | pathogenic | 0.131 | Stabilizing | 0.552 | D | 0.774 | deleterious | None | None | None | None | N |
E/K | 0.7957 | likely_pathogenic | 0.5953 | pathogenic | -0.56 | Destabilizing | 0.115 | N | 0.478 | neutral | N | 0.431668438 | None | None | N |
E/L | 0.9227 | likely_pathogenic | 0.8387 | pathogenic | 0.131 | Stabilizing | 0.378 | N | 0.761 | deleterious | None | None | None | None | N |
E/M | 0.9148 | likely_pathogenic | 0.8411 | pathogenic | 0.596 | Stabilizing | 0.934 | D | 0.734 | deleterious | None | None | None | None | N |
E/N | 0.7594 | likely_pathogenic | 0.6302 | pathogenic | -0.86 | Destabilizing | 0.08 | N | 0.474 | neutral | None | None | None | None | N |
E/P | 0.9986 | likely_pathogenic | 0.9967 | pathogenic | -0.134 | Destabilizing | 0.552 | D | 0.499 | neutral | None | None | None | None | N |
E/Q | 0.5713 | likely_pathogenic | 0.4026 | ambiguous | -0.76 | Destabilizing | 0.115 | N | 0.519 | neutral | N | 0.435316161 | None | None | N |
E/R | 0.897 | likely_pathogenic | 0.7759 | pathogenic | -0.41 | Destabilizing | 0.378 | N | 0.466 | neutral | None | None | None | None | N |
E/S | 0.7322 | likely_pathogenic | 0.5904 | pathogenic | -1.14 | Destabilizing | 0.08 | N | 0.449 | neutral | None | None | None | None | N |
E/T | 0.7569 | likely_pathogenic | 0.607 | pathogenic | -0.883 | Destabilizing | 0.147 | N | 0.519 | neutral | None | None | None | None | N |
E/V | 0.6903 | likely_pathogenic | 0.5602 | ambiguous | -0.134 | Destabilizing | 0.481 | N | 0.634 | neutral | N | 0.414820728 | None | None | N |
E/W | 0.9967 | likely_pathogenic | 0.9924 | pathogenic | -0.397 | Destabilizing | 0.934 | D | 0.749 | deleterious | None | None | None | None | N |
E/Y | 0.9761 | likely_pathogenic | 0.9487 | pathogenic | -0.313 | Destabilizing | 0.789 | D | 0.742 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.