Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14018 | 42277;42278;42279 | chr2:178634822;178634821;178634820 | chr2:179499549;179499548;179499547 |
N2AB | 12377 | 37354;37355;37356 | chr2:178634822;178634821;178634820 | chr2:179499549;179499548;179499547 |
N2A | 11450 | 34573;34574;34575 | chr2:178634822;178634821;178634820 | chr2:179499549;179499548;179499547 |
N2B | 4953 | 15082;15083;15084 | chr2:178634822;178634821;178634820 | chr2:179499549;179499548;179499547 |
Novex-1 | 5078 | 15457;15458;15459 | chr2:178634822;178634821;178634820 | chr2:179499549;179499548;179499547 |
Novex-2 | 5145 | 15658;15659;15660 | chr2:178634822;178634821;178634820 | chr2:179499549;179499548;179499547 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs766572300 | 0.056 | 0.999 | N | 0.741 | 0.173 | 0.146414634003 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66778E-04 |
K/N | rs766572300 | 0.056 | 0.999 | N | 0.741 | 0.173 | 0.146414634003 | gnomAD-4.0.0 | 2.05553E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80002E-06 | 0 | 1.65881E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8492 | likely_pathogenic | 0.8112 | pathogenic | -0.747 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
K/C | 0.893 | likely_pathogenic | 0.8714 | pathogenic | -0.802 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
K/D | 0.9372 | likely_pathogenic | 0.9283 | pathogenic | -0.343 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
K/E | 0.5777 | likely_pathogenic | 0.5352 | ambiguous | -0.213 | Destabilizing | 0.997 | D | 0.791 | deleterious | N | 0.497593633 | None | None | N |
K/F | 0.9598 | likely_pathogenic | 0.9428 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
K/G | 0.906 | likely_pathogenic | 0.8703 | pathogenic | -1.135 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
K/H | 0.522 | ambiguous | 0.4945 | ambiguous | -1.473 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/I | 0.6705 | likely_pathogenic | 0.6204 | pathogenic | 0.27 | Stabilizing | 0.999 | D | 0.779 | deleterious | N | 0.455606064 | None | None | N |
K/L | 0.7273 | likely_pathogenic | 0.6579 | pathogenic | 0.27 | Stabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
K/M | 0.5801 | likely_pathogenic | 0.5278 | ambiguous | 0.156 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
K/N | 0.7776 | likely_pathogenic | 0.7528 | pathogenic | -0.666 | Destabilizing | 0.999 | D | 0.741 | deleterious | N | 0.459300163 | None | None | N |
K/P | 0.991 | likely_pathogenic | 0.9856 | pathogenic | -0.039 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
K/Q | 0.2837 | likely_benign | 0.2623 | benign | -0.728 | Destabilizing | 0.999 | D | 0.726 | deleterious | N | 0.458706062 | None | None | N |
K/R | 0.116 | likely_benign | 0.1125 | benign | -0.71 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | N | 0.429251761 | None | None | N |
K/S | 0.8477 | likely_pathogenic | 0.8075 | pathogenic | -1.347 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
K/T | 0.5635 | ambiguous | 0.5102 | ambiguous | -1.0 | Destabilizing | 0.999 | D | 0.815 | deleterious | N | 0.426989824 | None | None | N |
K/V | 0.6353 | likely_pathogenic | 0.5929 | pathogenic | -0.039 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
K/W | 0.9608 | likely_pathogenic | 0.9414 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/Y | 0.9043 | likely_pathogenic | 0.8733 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.