Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14026 | 42301;42302;42303 | chr2:178634798;178634797;178634796 | chr2:179499525;179499524;179499523 |
N2AB | 12385 | 37378;37379;37380 | chr2:178634798;178634797;178634796 | chr2:179499525;179499524;179499523 |
N2A | 11458 | 34597;34598;34599 | chr2:178634798;178634797;178634796 | chr2:179499525;179499524;179499523 |
N2B | 4961 | 15106;15107;15108 | chr2:178634798;178634797;178634796 | chr2:179499525;179499524;179499523 |
Novex-1 | 5086 | 15481;15482;15483 | chr2:178634798;178634797;178634796 | chr2:179499525;179499524;179499523 |
Novex-2 | 5153 | 15682;15683;15684 | chr2:178634798;178634797;178634796 | chr2:179499525;179499524;179499523 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.994 | N | 0.607 | 0.34 | 0.432493127443 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8875 | likely_pathogenic | 0.8757 | pathogenic | -2.256 | Highly Destabilizing | 0.997 | D | 0.599 | neutral | N | 0.437547429 | None | None | N |
V/C | 0.9589 | likely_pathogenic | 0.9623 | pathogenic | -2.02 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/D | 0.9972 | likely_pathogenic | 0.9971 | pathogenic | -2.897 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | D | 0.526813242 | None | None | N |
V/E | 0.9932 | likely_pathogenic | 0.9924 | pathogenic | -2.758 | Highly Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
V/F | 0.9855 | likely_pathogenic | 0.9744 | pathogenic | -1.448 | Destabilizing | 0.999 | D | 0.86 | deleterious | D | 0.523832949 | None | None | N |
V/G | 0.911 | likely_pathogenic | 0.9116 | pathogenic | -2.7 | Highly Destabilizing | 0.999 | D | 0.864 | deleterious | D | 0.525795783 | None | None | N |
V/H | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/I | 0.3422 | ambiguous | 0.2501 | benign | -1.046 | Destabilizing | 0.994 | D | 0.575 | neutral | N | 0.518725445 | None | None | N |
V/K | 0.9967 | likely_pathogenic | 0.9958 | pathogenic | -1.884 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
V/L | 0.8906 | likely_pathogenic | 0.8228 | pathogenic | -1.046 | Destabilizing | 0.994 | D | 0.607 | neutral | N | 0.440066757 | None | None | N |
V/M | 0.9262 | likely_pathogenic | 0.8929 | pathogenic | -1.168 | Destabilizing | 0.999 | D | 0.735 | deleterious | None | None | None | None | N |
V/N | 0.987 | likely_pathogenic | 0.9874 | pathogenic | -2.076 | Highly Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
V/P | 0.9888 | likely_pathogenic | 0.9787 | pathogenic | -1.423 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
V/Q | 0.9933 | likely_pathogenic | 0.9932 | pathogenic | -2.082 | Highly Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
V/R | 0.9938 | likely_pathogenic | 0.9925 | pathogenic | -1.491 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
V/S | 0.9688 | likely_pathogenic | 0.9724 | pathogenic | -2.658 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/T | 0.8859 | likely_pathogenic | 0.8907 | pathogenic | -2.398 | Highly Destabilizing | 0.998 | D | 0.554 | neutral | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.81 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/Y | 0.9977 | likely_pathogenic | 0.9967 | pathogenic | -1.523 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.