Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14066 | 42421;42422;42423 | chr2:178634585;178634584;178634583 | chr2:179499312;179499311;179499310 |
N2AB | 12425 | 37498;37499;37500 | chr2:178634585;178634584;178634583 | chr2:179499312;179499311;179499310 |
N2A | 11498 | 34717;34718;34719 | chr2:178634585;178634584;178634583 | chr2:179499312;179499311;179499310 |
N2B | 5001 | 15226;15227;15228 | chr2:178634585;178634584;178634583 | chr2:179499312;179499311;179499310 |
Novex-1 | 5126 | 15601;15602;15603 | chr2:178634585;178634584;178634583 | chr2:179499312;179499311;179499310 |
Novex-2 | 5193 | 15802;15803;15804 | chr2:178634585;178634584;178634583 | chr2:179499312;179499311;179499310 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.999 | N | 0.701 | 0.441 | 0.49741755877 | gnomAD-4.0.0 | 1.59226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02608E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1855 | likely_benign | 0.2216 | benign | -1.041 | Destabilizing | 0.996 | D | 0.629 | neutral | N | 0.478389547 | None | None | N |
P/C | 0.8865 | likely_pathogenic | 0.924 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
P/D | 0.7566 | likely_pathogenic | 0.8347 | pathogenic | -0.697 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
P/E | 0.509 | ambiguous | 0.6079 | pathogenic | -0.779 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | N |
P/F | 0.8207 | likely_pathogenic | 0.8619 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
P/G | 0.6743 | likely_pathogenic | 0.7501 | pathogenic | -1.247 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
P/H | 0.4916 | ambiguous | 0.5655 | pathogenic | -0.756 | Destabilizing | 0.727 | D | 0.541 | neutral | None | None | None | None | N |
P/I | 0.7032 | likely_pathogenic | 0.7524 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/K | 0.6681 | likely_pathogenic | 0.7552 | pathogenic | -0.763 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
P/L | 0.3077 | likely_benign | 0.3626 | ambiguous | -0.62 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.453532463 | None | None | N |
P/M | 0.6549 | likely_pathogenic | 0.704 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
P/N | 0.7168 | likely_pathogenic | 0.7906 | pathogenic | -0.479 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | None | None | None | None | N |
P/Q | 0.3915 | ambiguous | 0.4802 | ambiguous | -0.757 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.494939089 | None | None | N |
P/R | 0.4822 | ambiguous | 0.5721 | pathogenic | -0.204 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | N | 0.498258773 | None | None | N |
P/S | 0.3591 | ambiguous | 0.4416 | ambiguous | -0.933 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.493855024 | None | None | N |
P/T | 0.3053 | likely_benign | 0.3695 | ambiguous | -0.917 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | N | 0.481147208 | None | None | N |
P/V | 0.5433 | ambiguous | 0.5911 | pathogenic | -0.725 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
P/W | 0.894 | likely_pathogenic | 0.9244 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/Y | 0.798 | likely_pathogenic | 0.8454 | pathogenic | -0.817 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.