Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14082 | 42469;42470;42471 | chr2:178634537;178634536;178634535 | chr2:179499264;179499263;179499262 |
N2AB | 12441 | 37546;37547;37548 | chr2:178634537;178634536;178634535 | chr2:179499264;179499263;179499262 |
N2A | 11514 | 34765;34766;34767 | chr2:178634537;178634536;178634535 | chr2:179499264;179499263;179499262 |
N2B | 5017 | 15274;15275;15276 | chr2:178634537;178634536;178634535 | chr2:179499264;179499263;179499262 |
Novex-1 | 5142 | 15649;15650;15651 | chr2:178634537;178634536;178634535 | chr2:179499264;179499263;179499262 |
Novex-2 | 5209 | 15850;15851;15852 | chr2:178634537;178634536;178634535 | chr2:179499264;179499263;179499262 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs907132563 | None | 0.044 | N | 0.154 | 0.144 | 0.0551355673512 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.31234E-04 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/K | rs907132563 | None | 0.044 | N | 0.154 | 0.144 | 0.0551355673512 | gnomAD-4.0.0 | 4.33938E-06 | None | None | None | None | N | None | 0 | 3.33656E-05 | None | 0 | 0 | None | 0 | 0 | 4.23898E-06 | 0 | 0 |
N/S | None | None | 0.91 | N | 0.498 | 0.227 | 0.154104182512 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2411 | likely_benign | 0.2506 | benign | -0.088 | Destabilizing | 0.97 | D | 0.525 | neutral | None | None | None | None | N |
N/C | 0.5511 | ambiguous | 0.5673 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
N/D | 0.146 | likely_benign | 0.1786 | benign | 0.101 | Stabilizing | 0.98 | D | 0.511 | neutral | N | 0.480458023 | None | None | N |
N/E | 0.4455 | ambiguous | 0.4727 | ambiguous | 0.057 | Stabilizing | 0.931 | D | 0.469 | neutral | None | None | None | None | N |
N/F | 0.7836 | likely_pathogenic | 0.7883 | pathogenic | -0.683 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
N/G | 0.3221 | likely_benign | 0.3345 | benign | -0.194 | Destabilizing | 0.985 | D | 0.473 | neutral | None | None | None | None | N |
N/H | 0.1442 | likely_benign | 0.1651 | benign | -0.171 | Destabilizing | 0.998 | D | 0.557 | neutral | N | 0.501101369 | None | None | N |
N/I | 0.4252 | ambiguous | 0.4301 | ambiguous | 0.096 | Stabilizing | 0.998 | D | 0.637 | neutral | N | 0.492659572 | None | None | N |
N/K | 0.3377 | likely_benign | 0.3568 | ambiguous | 0.114 | Stabilizing | 0.044 | N | 0.154 | neutral | N | 0.39727612 | None | None | N |
N/L | 0.3994 | ambiguous | 0.4022 | ambiguous | 0.096 | Stabilizing | 0.985 | D | 0.551 | neutral | None | None | None | None | N |
N/M | 0.512 | ambiguous | 0.5145 | ambiguous | -0.027 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
N/P | 0.4425 | ambiguous | 0.4647 | ambiguous | 0.058 | Stabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | N |
N/Q | 0.4214 | ambiguous | 0.4285 | ambiguous | -0.147 | Destabilizing | 0.97 | D | 0.503 | neutral | None | None | None | None | N |
N/R | 0.4049 | ambiguous | 0.4368 | ambiguous | 0.199 | Stabilizing | 0.942 | D | 0.48 | neutral | None | None | None | None | N |
N/S | 0.0846 | likely_benign | 0.0898 | benign | 0.019 | Stabilizing | 0.91 | D | 0.498 | neutral | N | 0.481201794 | None | None | N |
N/T | 0.1702 | likely_benign | 0.1617 | benign | 0.089 | Stabilizing | 0.98 | D | 0.479 | neutral | N | 0.457926175 | None | None | N |
N/V | 0.3639 | ambiguous | 0.3686 | ambiguous | 0.058 | Stabilizing | 0.996 | D | 0.556 | neutral | None | None | None | None | N |
N/W | 0.9044 | likely_pathogenic | 0.9084 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
N/Y | 0.323 | likely_benign | 0.344 | ambiguous | -0.495 | Destabilizing | 0.998 | D | 0.643 | neutral | D | 0.538763303 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.