Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14089 | 42490;42491;42492 | chr2:178634516;178634515;178634514 | chr2:179499243;179499242;179499241 |
N2AB | 12448 | 37567;37568;37569 | chr2:178634516;178634515;178634514 | chr2:179499243;179499242;179499241 |
N2A | 11521 | 34786;34787;34788 | chr2:178634516;178634515;178634514 | chr2:179499243;179499242;179499241 |
N2B | 5024 | 15295;15296;15297 | chr2:178634516;178634515;178634514 | chr2:179499243;179499242;179499241 |
Novex-1 | 5149 | 15670;15671;15672 | chr2:178634516;178634515;178634514 | chr2:179499243;179499242;179499241 |
Novex-2 | 5216 | 15871;15872;15873 | chr2:178634516;178634515;178634514 | chr2:179499243;179499242;179499241 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs201340186 | 0.057 | 0.693 | N | 0.301 | 0.137 | None | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 1.59898E-04 | 2.35E-05 | 1.40687E-04 |
P/H | rs201340186 | 0.057 | 0.693 | N | 0.301 | 0.137 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 1.89143E-04 | 0 | 0 | 0 | 0 |
P/H | rs201340186 | 0.057 | 0.693 | N | 0.301 | 0.137 | None | gnomAD-4.0.0 | 8.97489E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.28062E-05 | 0 | 4.7892E-06 | 0 | 2.84689E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0897 | likely_benign | 0.075 | benign | -0.299 | Destabilizing | 0.001 | N | 0.117 | neutral | N | 0.382581408 | None | None | I |
P/C | 0.6177 | likely_pathogenic | 0.5474 | ambiguous | -0.781 | Destabilizing | 0.901 | D | 0.308 | neutral | None | None | None | None | I |
P/D | 0.3027 | likely_benign | 0.2582 | benign | -0.299 | Destabilizing | 0.001 | N | 0.152 | neutral | None | None | None | None | I |
P/E | 0.2372 | likely_benign | 0.2007 | benign | -0.42 | Destabilizing | 0.08 | N | 0.274 | neutral | None | None | None | None | I |
P/F | 0.6323 | likely_pathogenic | 0.541 | ambiguous | -0.711 | Destabilizing | 0.596 | D | 0.381 | neutral | None | None | None | None | I |
P/G | 0.2974 | likely_benign | 0.2503 | benign | -0.345 | Destabilizing | 0.036 | N | 0.258 | neutral | None | None | None | None | I |
P/H | 0.2252 | likely_benign | 0.1815 | benign | 0.013 | Stabilizing | 0.693 | D | 0.301 | neutral | N | 0.412075947 | None | None | I |
P/I | 0.4059 | ambiguous | 0.3146 | benign | -0.322 | Destabilizing | 0.174 | N | 0.335 | neutral | None | None | None | None | I |
P/K | 0.2514 | likely_benign | 0.2062 | benign | -0.329 | Destabilizing | 0.08 | N | 0.281 | neutral | None | None | None | None | I |
P/L | 0.1768 | likely_benign | 0.1413 | benign | -0.322 | Destabilizing | None | N | 0.189 | neutral | N | 0.437153568 | None | None | I |
P/M | 0.3424 | ambiguous | 0.2737 | benign | -0.524 | Destabilizing | 0.596 | D | 0.301 | neutral | None | None | None | None | I |
P/N | 0.2471 | likely_benign | 0.2019 | benign | -0.131 | Destabilizing | 0.002 | N | 0.171 | neutral | None | None | None | None | I |
P/Q | 0.166 | likely_benign | 0.1377 | benign | -0.345 | Destabilizing | 0.296 | N | 0.345 | neutral | None | None | None | None | I |
P/R | 0.2047 | likely_benign | 0.1746 | benign | 0.104 | Stabilizing | 0.241 | N | 0.355 | neutral | N | 0.378513747 | None | None | I |
P/S | 0.1159 | likely_benign | 0.0977 | benign | -0.44 | Destabilizing | 0.001 | N | 0.115 | neutral | N | 0.338927173 | None | None | I |
P/T | 0.0904 | likely_benign | 0.0748 | benign | -0.472 | Destabilizing | None | N | 0.115 | neutral | N | 0.386192754 | None | None | I |
P/V | 0.2943 | likely_benign | 0.2289 | benign | -0.287 | Destabilizing | 0.08 | N | 0.239 | neutral | None | None | None | None | I |
P/W | 0.749 | likely_pathogenic | 0.6954 | pathogenic | -0.764 | Destabilizing | 0.972 | D | 0.299 | neutral | None | None | None | None | I |
P/Y | 0.5765 | likely_pathogenic | 0.486 | ambiguous | -0.489 | Destabilizing | 0.749 | D | 0.365 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.