Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14095 | 42508;42509;42510 | chr2:178634498;178634497;178634496 | chr2:179499225;179499224;179499223 |
N2AB | 12454 | 37585;37586;37587 | chr2:178634498;178634497;178634496 | chr2:179499225;179499224;179499223 |
N2A | 11527 | 34804;34805;34806 | chr2:178634498;178634497;178634496 | chr2:179499225;179499224;179499223 |
N2B | 5030 | 15313;15314;15315 | chr2:178634498;178634497;178634496 | chr2:179499225;179499224;179499223 |
Novex-1 | 5155 | 15688;15689;15690 | chr2:178634498;178634497;178634496 | chr2:179499225;179499224;179499223 |
Novex-2 | 5222 | 15889;15890;15891 | chr2:178634498;178634497;178634496 | chr2:179499225;179499224;179499223 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs762662244 | -1.187 | 0.989 | D | 0.447 | 0.346 | 0.505518066752 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
S/F | rs762662244 | -1.187 | 0.989 | D | 0.447 | 0.346 | 0.505518066752 | gnomAD-4.0.0 | 1.59237E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77639E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2295 | likely_benign | 0.2538 | benign | -0.537 | Destabilizing | 0.454 | N | 0.366 | neutral | N | 0.508243773 | None | None | N |
S/C | 0.2163 | likely_benign | 0.2193 | benign | -0.345 | Destabilizing | 0.997 | D | 0.363 | neutral | D | 0.522729845 | None | None | N |
S/D | 0.5797 | likely_pathogenic | 0.5959 | pathogenic | 0.299 | Stabilizing | 0.007 | N | 0.144 | neutral | None | None | None | None | N |
S/E | 0.8879 | likely_pathogenic | 0.8834 | pathogenic | 0.222 | Stabilizing | 0.525 | D | 0.338 | neutral | None | None | None | None | N |
S/F | 0.8028 | likely_pathogenic | 0.8226 | pathogenic | -1.132 | Destabilizing | 0.989 | D | 0.447 | neutral | D | 0.615889607 | None | None | N |
S/G | 0.0871 | likely_benign | 0.0904 | benign | -0.661 | Destabilizing | 0.002 | N | 0.133 | neutral | None | None | None | None | N |
S/H | 0.7209 | likely_pathogenic | 0.6924 | pathogenic | -1.117 | Destabilizing | 0.991 | D | 0.338 | neutral | None | None | None | None | N |
S/I | 0.7396 | likely_pathogenic | 0.7491 | pathogenic | -0.337 | Destabilizing | 0.991 | D | 0.467 | neutral | None | None | None | None | N |
S/K | 0.9362 | likely_pathogenic | 0.9288 | pathogenic | -0.445 | Destabilizing | 0.842 | D | 0.324 | neutral | None | None | None | None | N |
S/L | 0.4288 | ambiguous | 0.4473 | ambiguous | -0.337 | Destabilizing | 0.915 | D | 0.445 | neutral | None | None | None | None | N |
S/M | 0.6209 | likely_pathogenic | 0.6288 | pathogenic | -0.134 | Destabilizing | 0.998 | D | 0.341 | neutral | None | None | None | None | N |
S/N | 0.249 | likely_benign | 0.2425 | benign | -0.229 | Destabilizing | 0.842 | D | 0.369 | neutral | None | None | None | None | N |
S/P | 0.8984 | likely_pathogenic | 0.9225 | pathogenic | -0.375 | Destabilizing | 0.989 | D | 0.366 | neutral | D | 0.614010819 | None | None | N |
S/Q | 0.8626 | likely_pathogenic | 0.8471 | pathogenic | -0.421 | Destabilizing | 0.974 | D | 0.382 | neutral | None | None | None | None | N |
S/R | 0.8885 | likely_pathogenic | 0.8848 | pathogenic | -0.274 | Destabilizing | 0.974 | D | 0.375 | neutral | None | None | None | None | N |
S/T | 0.1321 | likely_benign | 0.1391 | benign | -0.334 | Destabilizing | 0.891 | D | 0.366 | neutral | N | 0.471534802 | None | None | N |
S/V | 0.6787 | likely_pathogenic | 0.7005 | pathogenic | -0.375 | Destabilizing | 0.974 | D | 0.469 | neutral | None | None | None | None | N |
S/W | 0.8372 | likely_pathogenic | 0.8396 | pathogenic | -1.13 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
S/Y | 0.719 | likely_pathogenic | 0.7161 | pathogenic | -0.848 | Destabilizing | 0.989 | D | 0.443 | neutral | D | 0.575677048 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.