Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14123 | 42592;42593;42594 | chr2:178634414;178634413;178634412 | chr2:179499141;179499140;179499139 |
N2AB | 12482 | 37669;37670;37671 | chr2:178634414;178634413;178634412 | chr2:179499141;179499140;179499139 |
N2A | 11555 | 34888;34889;34890 | chr2:178634414;178634413;178634412 | chr2:179499141;179499140;179499139 |
N2B | 5058 | 15397;15398;15399 | chr2:178634414;178634413;178634412 | chr2:179499141;179499140;179499139 |
Novex-1 | 5183 | 15772;15773;15774 | chr2:178634414;178634413;178634412 | chr2:179499141;179499140;179499139 |
Novex-2 | 5250 | 15973;15974;15975 | chr2:178634414;178634413;178634412 | chr2:179499141;179499140;179499139 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.374 | N | 0.454 | 0.135 | 0.12205267543 | gnomAD-4.0.0 | 1.5931E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86077E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1271 | likely_benign | 0.1424 | benign | -1.398 | Destabilizing | 0.76 | D | 0.551 | neutral | N | 0.444685224 | None | None | N |
T/C | 0.4695 | ambiguous | 0.505 | ambiguous | -1.019 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
T/D | 0.6061 | likely_pathogenic | 0.6314 | pathogenic | -1.127 | Destabilizing | 0.986 | D | 0.642 | neutral | None | None | None | None | N |
T/E | 0.3816 | ambiguous | 0.4342 | ambiguous | -0.944 | Destabilizing | 0.986 | D | 0.64 | neutral | None | None | None | None | N |
T/F | 0.2847 | likely_benign | 0.3454 | ambiguous | -1.257 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
T/G | 0.4336 | ambiguous | 0.4953 | ambiguous | -1.784 | Destabilizing | 0.06 | N | 0.479 | neutral | None | None | None | None | N |
T/H | 0.2957 | likely_benign | 0.3578 | ambiguous | -1.819 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/I | 0.2133 | likely_benign | 0.2389 | benign | -0.387 | Destabilizing | 0.991 | D | 0.678 | prob.neutral | N | 0.502928138 | None | None | N |
T/K | 0.3342 | likely_benign | 0.3877 | ambiguous | -0.371 | Destabilizing | 0.986 | D | 0.636 | neutral | None | None | None | None | N |
T/L | 0.1482 | likely_benign | 0.1803 | benign | -0.387 | Destabilizing | 0.976 | D | 0.587 | neutral | None | None | None | None | N |
T/M | 0.1052 | likely_benign | 0.1215 | benign | -0.311 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | N |
T/N | 0.2226 | likely_benign | 0.229 | benign | -0.978 | Destabilizing | 0.982 | D | 0.51 | neutral | D | 0.634946974 | None | None | N |
T/P | 0.9073 | likely_pathogenic | 0.9173 | pathogenic | -0.695 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | D | 0.635083753 | None | None | N |
T/Q | 0.2849 | likely_benign | 0.3454 | ambiguous | -0.856 | Destabilizing | 0.993 | D | 0.675 | prob.neutral | None | None | None | None | N |
T/R | 0.244 | likely_benign | 0.2943 | benign | -0.513 | Destabilizing | 0.993 | D | 0.674 | neutral | None | None | None | None | N |
T/S | 0.1311 | likely_benign | 0.1439 | benign | -1.34 | Destabilizing | 0.374 | N | 0.454 | neutral | N | 0.446378236 | None | None | N |
T/V | 0.1658 | likely_benign | 0.1924 | benign | -0.695 | Destabilizing | 0.976 | D | 0.509 | neutral | None | None | None | None | N |
T/W | 0.6598 | likely_pathogenic | 0.7591 | pathogenic | -1.242 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
T/Y | 0.344 | ambiguous | 0.4203 | ambiguous | -0.903 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.