Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14134 | 42625;42626;42627 | chr2:178634381;178634380;178634379 | chr2:179499108;179499107;179499106 |
N2AB | 12493 | 37702;37703;37704 | chr2:178634381;178634380;178634379 | chr2:179499108;179499107;179499106 |
N2A | 11566 | 34921;34922;34923 | chr2:178634381;178634380;178634379 | chr2:179499108;179499107;179499106 |
N2B | 5069 | 15430;15431;15432 | chr2:178634381;178634380;178634379 | chr2:179499108;179499107;179499106 |
Novex-1 | 5194 | 15805;15806;15807 | chr2:178634381;178634380;178634379 | chr2:179499108;179499107;179499106 |
Novex-2 | 5261 | 16006;16007;16008 | chr2:178634381;178634380;178634379 | chr2:179499108;179499107;179499106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/P | rs764083952 | 0.067 | 0.232 | N | 0.579 | 0.135 | 0.188950314367 | gnomAD-2.1.1 | 8.3E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.46E-05 | None | 0 | 9.1E-06 | 0 |
R/P | rs764083952 | 0.067 | 0.232 | N | 0.579 | 0.135 | 0.188950314367 | gnomAD-4.0.0 | 2.06359E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.37074E-05 | 1.66572E-05 |
R/Q | rs764083952 | 0.224 | None | N | 0.215 | 0.04 | 0.0401082797425 | gnomAD-2.1.1 | 2.94E-05 | None | None | None | None | I | None | 0 | 9.03E-05 | None | 0 | 1.58865E-04 | None | 0 | None | 0 | 1.6E-05 | 0 |
R/Q | rs764083952 | 0.224 | None | N | 0.215 | 0.04 | 0.0401082797425 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.94024E-04 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/Q | rs764083952 | 0.224 | None | N | 0.215 | 0.04 | 0.0401082797425 | gnomAD-4.0.0 | 1.86824E-05 | None | None | None | None | I | None | 1.34902E-05 | 5.20743E-05 | None | 3.4009E-05 | 6.72013E-05 | None | 0 | 1.65399E-04 | 1.52811E-05 | 1.12128E-05 | 3.21947E-05 |
R/W | rs753341792 | -0.455 | 0.964 | N | 0.505 | 0.145 | 0.235038932564 | gnomAD-2.1.1 | 4.12E-05 | None | None | None | None | I | None | 0 | 1.81796E-04 | None | 0 | 1.14312E-04 | None | 0 | None | 0 | 1.81E-05 | 0 |
R/W | rs753341792 | -0.455 | 0.964 | N | 0.505 | 0.145 | 0.235038932564 | gnomAD-3.1.2 | 4.61E-05 | None | None | None | None | I | None | 0 | 1.97031E-04 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 2.07727E-04 | 0 |
R/W | rs753341792 | -0.455 | 0.964 | N | 0.505 | 0.145 | 0.235038932564 | gnomAD-4.0.0 | 2.67458E-05 | None | None | None | None | I | None | 0 | 1.54353E-04 | None | 0 | 4.47989E-05 | None | 0 | 0 | 2.54581E-05 | 2.22955E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3316 | likely_benign | 0.3016 | benign | -0.903 | Destabilizing | 0.016 | N | 0.383 | neutral | None | None | None | None | I |
R/C | 0.1828 | likely_benign | 0.1609 | benign | -0.861 | Destabilizing | 0.864 | D | 0.503 | neutral | None | None | None | None | I |
R/D | 0.5793 | likely_pathogenic | 0.5792 | pathogenic | -0.02 | Destabilizing | 0.072 | N | 0.557 | neutral | None | None | None | None | I |
R/E | 0.2741 | likely_benign | 0.2535 | benign | 0.142 | Stabilizing | 0.016 | N | 0.401 | neutral | None | None | None | None | I |
R/F | 0.5453 | ambiguous | 0.539 | ambiguous | -0.534 | Destabilizing | 0.628 | D | 0.537 | neutral | None | None | None | None | I |
R/G | 0.2783 | likely_benign | 0.2784 | benign | -1.239 | Destabilizing | 0.058 | N | 0.51 | neutral | N | 0.445593574 | None | None | I |
R/H | 0.0886 | likely_benign | 0.0881 | benign | -1.453 | Destabilizing | 0.214 | N | 0.591 | neutral | None | None | None | None | I |
R/I | 0.2768 | likely_benign | 0.2516 | benign | 0.015 | Stabilizing | 0.356 | N | 0.553 | neutral | None | None | None | None | I |
R/K | 0.0794 | likely_benign | 0.083 | benign | -0.712 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | I |
R/L | 0.2155 | likely_benign | 0.192 | benign | 0.015 | Stabilizing | 0.13 | N | 0.543 | neutral | N | 0.447575222 | None | None | I |
R/M | 0.2594 | likely_benign | 0.245 | benign | -0.475 | Destabilizing | 0.356 | N | 0.563 | neutral | None | None | None | None | I |
R/N | 0.3608 | ambiguous | 0.3363 | benign | -0.402 | Destabilizing | 0.072 | N | 0.519 | neutral | None | None | None | None | I |
R/P | 0.7876 | likely_pathogenic | 0.7286 | pathogenic | -0.271 | Destabilizing | 0.232 | N | 0.579 | neutral | N | 0.444888301 | None | None | I |
R/Q | 0.0805 | likely_benign | 0.0715 | benign | -0.453 | Destabilizing | None | N | 0.215 | neutral | N | 0.418362491 | None | None | I |
R/S | 0.3258 | likely_benign | 0.313 | benign | -1.189 | Destabilizing | 0.003 | N | 0.261 | neutral | None | None | None | None | I |
R/T | 0.1626 | likely_benign | 0.1427 | benign | -0.825 | Destabilizing | 0.038 | N | 0.555 | neutral | None | None | None | None | I |
R/V | 0.31 | likely_benign | 0.294 | benign | -0.271 | Destabilizing | 0.072 | N | 0.577 | neutral | None | None | None | None | I |
R/W | 0.2301 | likely_benign | 0.2133 | benign | -0.168 | Destabilizing | 0.964 | D | 0.505 | neutral | N | 0.452720368 | None | None | I |
R/Y | 0.3585 | ambiguous | 0.3529 | ambiguous | 0.079 | Stabilizing | 0.356 | N | 0.555 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.