Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14152 | 42679;42680;42681 | chr2:178634045;178634044;178634043 | chr2:179498772;179498771;179498770 |
N2AB | 12511 | 37756;37757;37758 | chr2:178634045;178634044;178634043 | chr2:179498772;179498771;179498770 |
N2A | 11584 | 34975;34976;34977 | chr2:178634045;178634044;178634043 | chr2:179498772;179498771;179498770 |
N2B | 5087 | 15484;15485;15486 | chr2:178634045;178634044;178634043 | chr2:179498772;179498771;179498770 |
Novex-1 | 5212 | 15859;15860;15861 | chr2:178634045;178634044;178634043 | chr2:179498772;179498771;179498770 |
Novex-2 | 5279 | 16060;16061;16062 | chr2:178634045;178634044;178634043 | chr2:179498772;179498771;179498770 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1472786496 | -0.093 | 0.999 | D | 0.48 | 0.453 | 0.438170831126 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1472786496 | -0.093 | 0.999 | D | 0.48 | 0.453 | 0.438170831126 | gnomAD-4.0.0 | 1.5927E-06 | None | None | None | None | N | None | 5.66701E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1278 | likely_benign | 0.1307 | benign | -0.405 | Destabilizing | 0.999 | D | 0.48 | neutral | D | 0.574838035 | None | None | N |
T/C | 0.6185 | likely_pathogenic | 0.6295 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.578 | neutral | None | None | None | None | N |
T/D | 0.469 | ambiguous | 0.4971 | ambiguous | 0.127 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/E | 0.275 | likely_benign | 0.3027 | benign | 0.111 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/F | 0.3413 | ambiguous | 0.3424 | ambiguous | -0.568 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
T/G | 0.5334 | ambiguous | 0.5586 | ambiguous | -0.627 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
T/H | 0.3333 | likely_benign | 0.3608 | ambiguous | -0.843 | Destabilizing | 1.0 | D | 0.571 | neutral | None | None | None | None | N |
T/I | 0.1468 | likely_benign | 0.138 | benign | 0.077 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | D | 0.579104188 | None | None | N |
T/K | 0.2191 | likely_benign | 0.2578 | benign | -0.544 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.496484528 | None | None | N |
T/L | 0.1331 | likely_benign | 0.1326 | benign | 0.077 | Stabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
T/M | 0.0947 | likely_benign | 0.0929 | benign | 0.029 | Stabilizing | 1.0 | D | 0.594 | neutral | None | None | None | None | N |
T/N | 0.1664 | likely_benign | 0.175 | benign | -0.458 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
T/P | 0.3405 | ambiguous | 0.3952 | ambiguous | -0.051 | Destabilizing | 1.0 | D | 0.67 | neutral | D | 0.660008444 | None | None | N |
T/Q | 0.2583 | likely_benign | 0.2835 | benign | -0.569 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
T/R | 0.1983 | likely_benign | 0.2227 | benign | -0.323 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.501267539 | None | None | N |
T/S | 0.1913 | likely_benign | 0.1932 | benign | -0.687 | Destabilizing | 0.999 | D | 0.499 | neutral | N | 0.50306955 | None | None | N |
T/V | 0.1307 | likely_benign | 0.13 | benign | -0.051 | Destabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | N |
T/W | 0.6963 | likely_pathogenic | 0.7128 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
T/Y | 0.3601 | ambiguous | 0.3911 | ambiguous | -0.315 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.