Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14163 | 42712;42713;42714 | chr2:178634012;178634011;178634010 | chr2:179498739;179498738;179498737 |
N2AB | 12522 | 37789;37790;37791 | chr2:178634012;178634011;178634010 | chr2:179498739;179498738;179498737 |
N2A | 11595 | 35008;35009;35010 | chr2:178634012;178634011;178634010 | chr2:179498739;179498738;179498737 |
N2B | 5098 | 15517;15518;15519 | chr2:178634012;178634011;178634010 | chr2:179498739;179498738;179498737 |
Novex-1 | 5223 | 15892;15893;15894 | chr2:178634012;178634011;178634010 | chr2:179498739;179498738;179498737 |
Novex-2 | 5290 | 16093;16094;16095 | chr2:178634012;178634011;178634010 | chr2:179498739;179498738;179498737 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs1310975229 | -2.674 | 0.784 | D | 0.733 | 0.414 | 0.831548404372 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
C/G | rs1310975229 | -2.674 | 0.784 | D | 0.733 | 0.414 | 0.831548404372 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77531E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7797 | likely_pathogenic | 0.7967 | pathogenic | -1.612 | Destabilizing | 0.465 | N | 0.498 | neutral | None | None | None | None | N |
C/D | 0.9965 | likely_pathogenic | 0.9977 | pathogenic | -1.721 | Destabilizing | 0.936 | D | 0.787 | deleterious | None | None | None | None | N |
C/E | 0.9975 | likely_pathogenic | 0.9984 | pathogenic | -1.472 | Destabilizing | 0.936 | D | 0.787 | deleterious | None | None | None | None | N |
C/F | 0.3381 | likely_benign | 0.4661 | ambiguous | -0.962 | Destabilizing | 0.001 | N | 0.518 | neutral | N | 0.48912493 | None | None | N |
C/G | 0.6869 | likely_pathogenic | 0.6827 | pathogenic | -1.976 | Destabilizing | 0.784 | D | 0.733 | prob.delet. | D | 0.63357904 | None | None | N |
C/H | 0.9826 | likely_pathogenic | 0.9891 | pathogenic | -2.237 | Highly Destabilizing | 0.981 | D | 0.801 | deleterious | None | None | None | None | N |
C/I | 0.6604 | likely_pathogenic | 0.6933 | pathogenic | -0.619 | Destabilizing | 0.329 | N | 0.623 | neutral | None | None | None | None | N |
C/K | 0.9979 | likely_pathogenic | 0.9988 | pathogenic | -1.271 | Destabilizing | 0.936 | D | 0.767 | deleterious | None | None | None | None | N |
C/L | 0.6068 | likely_pathogenic | 0.6318 | pathogenic | -0.619 | Destabilizing | 0.001 | N | 0.499 | neutral | None | None | None | None | N |
C/M | 0.7683 | likely_pathogenic | 0.8264 | pathogenic | 0.195 | Stabilizing | 0.893 | D | 0.754 | deleterious | None | None | None | None | N |
C/N | 0.9841 | likely_pathogenic | 0.9882 | pathogenic | -1.944 | Destabilizing | 0.981 | D | 0.795 | deleterious | None | None | None | None | N |
C/P | 0.9981 | likely_pathogenic | 0.9986 | pathogenic | -0.928 | Destabilizing | 0.981 | D | 0.796 | deleterious | None | None | None | None | N |
C/Q | 0.9909 | likely_pathogenic | 0.9944 | pathogenic | -1.415 | Destabilizing | 0.981 | D | 0.8 | deleterious | None | None | None | None | N |
C/R | 0.983 | likely_pathogenic | 0.9879 | pathogenic | -1.729 | Destabilizing | 0.975 | D | 0.797 | deleterious | D | 0.634676543 | None | None | N |
C/S | 0.8573 | likely_pathogenic | 0.8593 | pathogenic | -2.21 | Highly Destabilizing | 0.6 | D | 0.66 | neutral | D | 0.593861326 | None | None | N |
C/T | 0.8305 | likely_pathogenic | 0.8378 | pathogenic | -1.78 | Destabilizing | 0.665 | D | 0.657 | neutral | None | None | None | None | N |
C/V | 0.5409 | ambiguous | 0.5709 | pathogenic | -0.928 | Destabilizing | 0.329 | N | 0.624 | neutral | None | None | None | None | N |
C/W | 0.9053 | likely_pathogenic | 0.937 | pathogenic | -1.442 | Destabilizing | 0.975 | D | 0.787 | deleterious | D | 0.634676543 | None | None | N |
C/Y | 0.8287 | likely_pathogenic | 0.8717 | pathogenic | -1.225 | Destabilizing | 0.473 | N | 0.715 | prob.delet. | D | 0.63357904 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.