Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14170 | 42733;42734;42735 | chr2:178633991;178633990;178633989 | chr2:179498718;179498717;179498716 |
N2AB | 12529 | 37810;37811;37812 | chr2:178633991;178633990;178633989 | chr2:179498718;179498717;179498716 |
N2A | 11602 | 35029;35030;35031 | chr2:178633991;178633990;178633989 | chr2:179498718;179498717;179498716 |
N2B | 5105 | 15538;15539;15540 | chr2:178633991;178633990;178633989 | chr2:179498718;179498717;179498716 |
Novex-1 | 5230 | 15913;15914;15915 | chr2:178633991;178633990;178633989 | chr2:179498718;179498717;179498716 |
Novex-2 | 5297 | 16114;16115;16116 | chr2:178633991;178633990;178633989 | chr2:179498718;179498717;179498716 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1380128621 | -1.73 | 0.01 | N | 0.106 | 0.226 | 0.477143196806 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/I | rs1380128621 | -1.73 | 0.01 | N | 0.106 | 0.226 | 0.477143196806 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/I | rs1380128621 | -1.73 | 0.01 | N | 0.106 | 0.226 | 0.477143196806 | gnomAD-4.0.0 | 6.84371E-07 | None | None | None | None | N | None | 0 | 2.23654E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/R | rs369623392 | None | 0.991 | N | 0.55 | 0.534 | 0.719157461425 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
M/R | rs369623392 | None | 0.991 | N | 0.55 | 0.534 | 0.719157461425 | gnomAD-4.0.0 | 6.58233E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
M/T | rs369623392 | -1.227 | 0.679 | N | 0.422 | 0.359 | None | gnomAD-2.1.1 | 1.28754E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 1.99872E-04 | 2.35195E-04 | 1.40687E-04 |
M/T | rs369623392 | -1.227 | 0.679 | N | 0.422 | 0.359 | None | gnomAD-3.1.2 | 7.24E-05 | None | None | None | None | N | None | 4.83E-05 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.17723E-04 | 0 | 0 |
M/T | rs369623392 | -1.227 | 0.679 | N | 0.422 | 0.359 | None | gnomAD-4.0.0 | 1.53118E-04 | None | None | None | None | N | None | 4.0093E-05 | 3.336E-05 | None | 0 | 0 | None | 1.56304E-04 | 0 | 1.91606E-04 | 0 | 9.61169E-05 |
M/V | None | None | 0.01 | N | 0.105 | 0.203 | 0.44711355012 | gnomAD-4.0.0 | 1.59213E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86013E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.5992 | likely_pathogenic | 0.5951 | pathogenic | -2.066 | Highly Destabilizing | 0.55 | D | 0.354 | neutral | None | None | None | None | N |
M/C | 0.8505 | likely_pathogenic | 0.8621 | pathogenic | -1.176 | Destabilizing | 0.993 | D | 0.498 | neutral | None | None | None | None | N |
M/D | 0.8864 | likely_pathogenic | 0.8983 | pathogenic | -0.974 | Destabilizing | 0.993 | D | 0.591 | neutral | None | None | None | None | N |
M/E | 0.6308 | likely_pathogenic | 0.6273 | pathogenic | -0.92 | Destabilizing | 0.977 | D | 0.511 | neutral | None | None | None | None | N |
M/F | 0.4923 | ambiguous | 0.4909 | ambiguous | -1.036 | Destabilizing | 0.932 | D | 0.421 | neutral | None | None | None | None | N |
M/G | 0.7899 | likely_pathogenic | 0.8002 | pathogenic | -2.364 | Highly Destabilizing | 0.977 | D | 0.547 | neutral | None | None | None | None | N |
M/H | 0.7179 | likely_pathogenic | 0.7043 | pathogenic | -1.31 | Destabilizing | 0.993 | D | 0.505 | neutral | None | None | None | None | N |
M/I | 0.5513 | ambiguous | 0.5148 | ambiguous | -1.269 | Destabilizing | 0.01 | N | 0.106 | neutral | N | 0.427663395 | None | None | N |
M/K | 0.4428 | ambiguous | 0.3689 | ambiguous | -0.941 | Destabilizing | 0.969 | D | 0.495 | neutral | N | 0.503216728 | None | None | N |
M/L | 0.2327 | likely_benign | 0.2165 | benign | -1.269 | Destabilizing | 0.166 | N | 0.17 | neutral | N | 0.481265152 | None | None | N |
M/N | 0.6303 | likely_pathogenic | 0.6265 | pathogenic | -0.803 | Destabilizing | 0.993 | D | 0.551 | neutral | None | None | None | None | N |
M/P | 0.9011 | likely_pathogenic | 0.8843 | pathogenic | -1.514 | Destabilizing | 0.993 | D | 0.56 | neutral | None | None | None | None | N |
M/Q | 0.3459 | ambiguous | 0.3598 | ambiguous | -0.864 | Destabilizing | 0.993 | D | 0.489 | neutral | None | None | None | None | N |
M/R | 0.4991 | ambiguous | 0.4232 | ambiguous | -0.41 | Destabilizing | 0.991 | D | 0.55 | neutral | N | 0.492245011 | None | None | N |
M/S | 0.615 | likely_pathogenic | 0.6143 | pathogenic | -1.347 | Destabilizing | 0.932 | D | 0.443 | neutral | None | None | None | None | N |
M/T | 0.4546 | ambiguous | 0.4148 | ambiguous | -1.19 | Destabilizing | 0.679 | D | 0.422 | neutral | N | 0.477807057 | None | None | N |
M/V | 0.2038 | likely_benign | 0.1796 | benign | -1.514 | Destabilizing | 0.01 | N | 0.105 | neutral | N | 0.362786381 | None | None | N |
M/W | 0.7994 | likely_pathogenic | 0.7806 | pathogenic | -0.934 | Destabilizing | 0.998 | D | 0.487 | neutral | None | None | None | None | N |
M/Y | 0.6649 | likely_pathogenic | 0.6597 | pathogenic | -1.022 | Destabilizing | 0.993 | D | 0.549 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.