Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14171 | 42736;42737;42738 | chr2:178633988;178633987;178633986 | chr2:179498715;179498714;179498713 |
N2AB | 12530 | 37813;37814;37815 | chr2:178633988;178633987;178633986 | chr2:179498715;179498714;179498713 |
N2A | 11603 | 35032;35033;35034 | chr2:178633988;178633987;178633986 | chr2:179498715;179498714;179498713 |
N2B | 5106 | 15541;15542;15543 | chr2:178633988;178633987;178633986 | chr2:179498715;179498714;179498713 |
Novex-1 | 5231 | 15916;15917;15918 | chr2:178633988;178633987;178633986 | chr2:179498715;179498714;179498713 |
Novex-2 | 5298 | 16117;16118;16119 | chr2:178633988;178633987;178633986 | chr2:179498715;179498714;179498713 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs142842339 | None | 0.784 | N | 0.31 | 0.2 | 0.0551355673512 | gnomAD-4.0.0 | 6.84363E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15953E-05 | 0 |
H/R | rs1288547551 | -0.001 | 0.784 | N | 0.282 | 0.237 | 0.253726318573 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
H/R | rs1288547551 | -0.001 | 0.784 | N | 0.282 | 0.237 | 0.253726318573 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/R | rs1288547551 | -0.001 | 0.784 | N | 0.282 | 0.237 | 0.253726318573 | gnomAD-4.0.0 | 4.95887E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78235E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1251 | likely_benign | 0.1931 | benign | 0.475 | Stabilizing | 0.3 | N | 0.267 | neutral | None | None | None | None | N |
H/C | 0.2346 | likely_benign | 0.2483 | benign | 0.618 | Stabilizing | 0.995 | D | 0.407 | neutral | None | None | None | None | N |
H/D | 0.1059 | likely_benign | 0.1622 | benign | -0.287 | Destabilizing | 0.6 | D | 0.353 | neutral | N | 0.384886102 | None | None | N |
H/E | 0.1594 | likely_benign | 0.2257 | benign | -0.281 | Destabilizing | 0.495 | N | 0.255 | neutral | None | None | None | None | N |
H/F | 0.3213 | likely_benign | 0.3399 | benign | 0.998 | Stabilizing | 0.704 | D | 0.509 | neutral | None | None | None | None | N |
H/G | 0.1873 | likely_benign | 0.2623 | benign | 0.257 | Stabilizing | 0.495 | N | 0.35 | neutral | None | None | None | None | N |
H/I | 0.2469 | likely_benign | 0.2932 | benign | 1.013 | Stabilizing | 0.543 | D | 0.414 | neutral | None | None | None | None | N |
H/K | 0.1401 | likely_benign | 0.1912 | benign | 0.363 | Stabilizing | 0.495 | N | 0.331 | neutral | None | None | None | None | N |
H/L | 0.1014 | likely_benign | 0.1148 | benign | 1.013 | Stabilizing | 0.002 | N | 0.321 | neutral | N | 0.360975869 | None | None | N |
H/M | 0.2936 | likely_benign | 0.362 | ambiguous | 0.644 | Stabilizing | 0.893 | D | 0.439 | neutral | None | None | None | None | N |
H/N | 0.059 | likely_benign | 0.0749 | benign | 0.212 | Stabilizing | 0.784 | D | 0.26 | neutral | N | 0.375472796 | None | None | N |
H/P | 0.0624 | likely_benign | 0.0871 | benign | 0.856 | Stabilizing | 0.001 | N | 0.198 | neutral | N | 0.283001201 | None | None | N |
H/Q | 0.1055 | likely_benign | 0.1722 | benign | 0.276 | Stabilizing | 0.784 | D | 0.31 | neutral | N | 0.384825779 | None | None | N |
H/R | 0.0914 | likely_benign | 0.1087 | benign | -0.143 | Destabilizing | 0.784 | D | 0.282 | neutral | N | 0.411654099 | None | None | N |
H/S | 0.1172 | likely_benign | 0.1723 | benign | 0.388 | Stabilizing | 0.495 | N | 0.335 | neutral | None | None | None | None | N |
H/T | 0.1432 | likely_benign | 0.2026 | benign | 0.483 | Stabilizing | 0.495 | N | 0.345 | neutral | None | None | None | None | N |
H/V | 0.1768 | likely_benign | 0.2304 | benign | 0.856 | Stabilizing | 0.329 | N | 0.333 | neutral | None | None | None | None | N |
H/W | 0.3947 | ambiguous | 0.4258 | ambiguous | 0.874 | Stabilizing | 0.995 | D | 0.429 | neutral | None | None | None | None | N |
H/Y | 0.1277 | likely_benign | 0.1262 | benign | 1.135 | Stabilizing | 0.784 | D | 0.307 | neutral | N | 0.478621272 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.