Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14178 | 42757;42758;42759 | chr2:178633967;178633966;178633965 | chr2:179498694;179498693;179498692 |
N2AB | 12537 | 37834;37835;37836 | chr2:178633967;178633966;178633965 | chr2:179498694;179498693;179498692 |
N2A | 11610 | 35053;35054;35055 | chr2:178633967;178633966;178633965 | chr2:179498694;179498693;179498692 |
N2B | 5113 | 15562;15563;15564 | chr2:178633967;178633966;178633965 | chr2:179498694;179498693;179498692 |
Novex-1 | 5238 | 15937;15938;15939 | chr2:178633967;178633966;178633965 | chr2:179498694;179498693;179498692 |
Novex-2 | 5305 | 16138;16139;16140 | chr2:178633967;178633966;178633965 | chr2:179498694;179498693;179498692 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.997 | N | 0.45 | 0.33 | 0.168933306366 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2635 | likely_benign | 0.2697 | benign | -0.159 | Destabilizing | 0.978 | D | 0.417 | neutral | N | 0.487791 | None | None | N |
D/C | 0.761 | likely_pathogenic | 0.7869 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
D/E | 0.1926 | likely_benign | 0.1823 | benign | -0.216 | Destabilizing | 0.37 | N | 0.304 | neutral | N | 0.436789163 | None | None | N |
D/F | 0.7625 | likely_pathogenic | 0.7581 | pathogenic | 0.009 | Stabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | N |
D/G | 0.1422 | likely_benign | 0.1523 | benign | -0.353 | Destabilizing | 0.121 | N | 0.321 | neutral | N | 0.409159186 | None | None | N |
D/H | 0.3741 | ambiguous | 0.4134 | ambiguous | 0.38 | Stabilizing | 1.0 | D | 0.447 | neutral | D | 0.531247628 | None | None | N |
D/I | 0.6075 | likely_pathogenic | 0.607 | pathogenic | 0.305 | Stabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | N |
D/K | 0.3992 | ambiguous | 0.4588 | ambiguous | 0.313 | Stabilizing | 0.995 | D | 0.45 | neutral | None | None | None | None | N |
D/L | 0.6032 | likely_pathogenic | 0.6151 | pathogenic | 0.305 | Stabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
D/M | 0.7563 | likely_pathogenic | 0.7645 | pathogenic | 0.231 | Stabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | N |
D/N | 0.1024 | likely_benign | 0.0975 | benign | -0.035 | Destabilizing | 0.997 | D | 0.45 | neutral | N | 0.450407411 | None | None | N |
D/P | 0.8615 | likely_pathogenic | 0.9009 | pathogenic | 0.172 | Stabilizing | 0.999 | D | 0.464 | neutral | None | None | None | None | N |
D/Q | 0.4065 | ambiguous | 0.4474 | ambiguous | 0.022 | Stabilizing | 0.995 | D | 0.466 | neutral | None | None | None | None | N |
D/R | 0.4725 | ambiguous | 0.5422 | ambiguous | 0.592 | Stabilizing | 0.995 | D | 0.445 | neutral | None | None | None | None | N |
D/S | 0.1534 | likely_benign | 0.1516 | benign | -0.154 | Destabilizing | 0.983 | D | 0.412 | neutral | None | None | None | None | N |
D/T | 0.3467 | ambiguous | 0.3462 | ambiguous | 0.008 | Stabilizing | 0.998 | D | 0.465 | neutral | None | None | None | None | N |
D/V | 0.4288 | ambiguous | 0.4227 | ambiguous | 0.172 | Stabilizing | 0.997 | D | 0.561 | neutral | D | 0.532893133 | None | None | N |
D/W | 0.9366 | likely_pathogenic | 0.9487 | pathogenic | 0.147 | Stabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | N |
D/Y | 0.3768 | ambiguous | 0.397 | ambiguous | 0.255 | Stabilizing | 1.0 | D | 0.54 | neutral | D | 0.531437662 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.