Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14183 | 42772;42773;42774 | chr2:178633952;178633951;178633950 | chr2:179498679;179498678;179498677 |
N2AB | 12542 | 37849;37850;37851 | chr2:178633952;178633951;178633950 | chr2:179498679;179498678;179498677 |
N2A | 11615 | 35068;35069;35070 | chr2:178633952;178633951;178633950 | chr2:179498679;179498678;179498677 |
N2B | 5118 | 15577;15578;15579 | chr2:178633952;178633951;178633950 | chr2:179498679;179498678;179498677 |
Novex-1 | 5243 | 15952;15953;15954 | chr2:178633952;178633951;178633950 | chr2:179498679;179498678;179498677 |
Novex-2 | 5310 | 16153;16154;16155 | chr2:178633952;178633951;178633950 | chr2:179498679;179498678;179498677 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs72650081 | None | 0.91 | N | 0.358 | 0.17 | 0.276482976112 | gnomAD-4.0.0 | 2.73737E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5985E-06 | 0 | 0 |
T/K | None | None | 0.98 | N | 0.422 | 0.379 | 0.421920138742 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/R | None | None | 0.998 | N | 0.469 | 0.379 | 0.501122797481 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0904 | likely_benign | 0.0937 | benign | -0.28 | Destabilizing | 0.91 | D | 0.358 | neutral | N | 0.481265982 | None | None | N |
T/C | 0.5166 | ambiguous | 0.5213 | ambiguous | -0.295 | Destabilizing | 1.0 | D | 0.512 | neutral | None | None | None | None | N |
T/D | 0.4479 | ambiguous | 0.4677 | ambiguous | 0.34 | Stabilizing | 0.985 | D | 0.42 | neutral | None | None | None | None | N |
T/E | 0.3731 | ambiguous | 0.4015 | ambiguous | 0.27 | Stabilizing | 0.985 | D | 0.423 | neutral | None | None | None | None | N |
T/F | 0.307 | likely_benign | 0.3516 | ambiguous | -0.783 | Destabilizing | 0.999 | D | 0.536 | neutral | None | None | None | None | N |
T/G | 0.2886 | likely_benign | 0.3275 | benign | -0.406 | Destabilizing | 0.985 | D | 0.457 | neutral | None | None | None | None | N |
T/H | 0.2802 | likely_benign | 0.2931 | benign | -0.656 | Destabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | N |
T/I | 0.2299 | likely_benign | 0.2372 | benign | -0.07 | Destabilizing | 0.998 | D | 0.467 | neutral | N | 0.512916716 | None | None | N |
T/K | 0.2395 | likely_benign | 0.2705 | benign | -0.298 | Destabilizing | 0.98 | D | 0.422 | neutral | N | 0.49726295 | None | None | N |
T/L | 0.1248 | likely_benign | 0.1294 | benign | -0.07 | Destabilizing | 0.985 | D | 0.385 | neutral | None | None | None | None | N |
T/M | 0.1375 | likely_benign | 0.1381 | benign | -0.058 | Destabilizing | 1.0 | D | 0.487 | neutral | None | None | None | None | N |
T/N | 0.1289 | likely_benign | 0.1194 | benign | -0.119 | Destabilizing | 0.999 | D | 0.397 | neutral | None | None | None | None | N |
T/P | 0.0837 | likely_benign | 0.0889 | benign | -0.111 | Destabilizing | 0.011 | N | 0.197 | neutral | N | 0.387402184 | None | None | N |
T/Q | 0.2611 | likely_benign | 0.2777 | benign | -0.293 | Destabilizing | 0.999 | D | 0.478 | neutral | None | None | None | None | N |
T/R | 0.1926 | likely_benign | 0.2123 | benign | -0.066 | Destabilizing | 0.998 | D | 0.469 | neutral | N | 0.502781422 | None | None | N |
T/S | 0.1273 | likely_benign | 0.1317 | benign | -0.33 | Destabilizing | 0.98 | D | 0.407 | neutral | N | 0.484712314 | None | None | N |
T/V | 0.1765 | likely_benign | 0.1835 | benign | -0.111 | Destabilizing | 0.985 | D | 0.348 | neutral | None | None | None | None | N |
T/W | 0.7015 | likely_pathogenic | 0.7423 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
T/Y | 0.3196 | likely_benign | 0.3559 | ambiguous | -0.52 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.