Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14195 | 42808;42809;42810 | chr2:178633916;178633915;178633914 | chr2:179498643;179498642;179498641 |
N2AB | 12554 | 37885;37886;37887 | chr2:178633916;178633915;178633914 | chr2:179498643;179498642;179498641 |
N2A | 11627 | 35104;35105;35106 | chr2:178633916;178633915;178633914 | chr2:179498643;179498642;179498641 |
N2B | 5130 | 15613;15614;15615 | chr2:178633916;178633915;178633914 | chr2:179498643;179498642;179498641 |
Novex-1 | 5255 | 15988;15989;15990 | chr2:178633916;178633915;178633914 | chr2:179498643;179498642;179498641 |
Novex-2 | 5322 | 16189;16190;16191 | chr2:178633916;178633915;178633914 | chr2:179498643;179498642;179498641 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.005 | N | 0.373 | 0.143 | 0.202086224978 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1017 | likely_benign | 0.0986 | benign | -0.713 | Destabilizing | 0.005 | N | 0.373 | neutral | N | 0.498993076 | None | None | N |
T/C | 0.3522 | ambiguous | 0.3701 | ambiguous | -0.433 | Destabilizing | 0.628 | D | 0.537 | neutral | None | None | None | None | N |
T/D | 0.4205 | ambiguous | 0.3975 | ambiguous | -0.838 | Destabilizing | 0.072 | N | 0.544 | neutral | None | None | None | None | N |
T/E | 0.2204 | likely_benign | 0.2344 | benign | -0.824 | Destabilizing | 0.016 | N | 0.46 | neutral | None | None | None | None | N |
T/F | 0.159 | likely_benign | 0.145 | benign | -0.741 | Destabilizing | 0.038 | N | 0.614 | neutral | None | None | None | None | N |
T/G | 0.321 | likely_benign | 0.3341 | benign | -0.993 | Destabilizing | 0.031 | N | 0.476 | neutral | None | None | None | None | N |
T/H | 0.1698 | likely_benign | 0.1919 | benign | -1.383 | Destabilizing | 0.628 | D | 0.567 | neutral | None | None | None | None | N |
T/I | 0.079 | likely_benign | 0.0777 | benign | -0.053 | Destabilizing | None | N | 0.223 | neutral | N | 0.459648004 | None | None | N |
T/K | 0.0961 | likely_benign | 0.1205 | benign | -0.857 | Destabilizing | None | N | 0.199 | neutral | None | None | None | None | N |
T/L | 0.079 | likely_benign | 0.0739 | benign | -0.053 | Destabilizing | None | N | 0.193 | neutral | None | None | None | None | N |
T/M | 0.0727 | likely_benign | 0.0726 | benign | 0.341 | Stabilizing | 0.214 | N | 0.564 | neutral | None | None | None | None | N |
T/N | 0.1126 | likely_benign | 0.1116 | benign | -0.881 | Destabilizing | 0.055 | N | 0.442 | neutral | N | 0.457475873 | None | None | N |
T/P | 0.5497 | ambiguous | 0.5291 | ambiguous | -0.24 | Destabilizing | 0.106 | N | 0.573 | neutral | N | 0.514744982 | None | None | N |
T/Q | 0.14 | likely_benign | 0.1659 | benign | -1.053 | Destabilizing | 0.072 | N | 0.55 | neutral | None | None | None | None | N |
T/R | 0.0877 | likely_benign | 0.0993 | benign | -0.637 | Destabilizing | None | N | 0.229 | neutral | None | None | None | None | N |
T/S | 0.1221 | likely_benign | 0.1236 | benign | -1.042 | Destabilizing | 0.024 | N | 0.415 | neutral | N | 0.470910689 | None | None | N |
T/V | 0.0869 | likely_benign | 0.0922 | benign | -0.24 | Destabilizing | None | N | 0.153 | neutral | None | None | None | None | N |
T/W | 0.4396 | ambiguous | 0.4597 | ambiguous | -0.742 | Destabilizing | 0.864 | D | 0.557 | neutral | None | None | None | None | N |
T/Y | 0.1743 | likely_benign | 0.1882 | benign | -0.49 | Destabilizing | 0.356 | N | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.