Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14197 | 42814;42815;42816 | chr2:178633910;178633909;178633908 | chr2:179498637;179498636;179498635 |
N2AB | 12556 | 37891;37892;37893 | chr2:178633910;178633909;178633908 | chr2:179498637;179498636;179498635 |
N2A | 11629 | 35110;35111;35112 | chr2:178633910;178633909;178633908 | chr2:179498637;179498636;179498635 |
N2B | 5132 | 15619;15620;15621 | chr2:178633910;178633909;178633908 | chr2:179498637;179498636;179498635 |
Novex-1 | 5257 | 15994;15995;15996 | chr2:178633910;178633909;178633908 | chr2:179498637;179498636;179498635 |
Novex-2 | 5324 | 16195;16196;16197 | chr2:178633910;178633909;178633908 | chr2:179498637;179498636;179498635 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.003 | D | 0.268 | 0.088 | 0.165133752707 | gnomAD-4.0.0 | 6.8435E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99625E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5528 | ambiguous | 0.5296 | ambiguous | -1.046 | Destabilizing | 0.345 | N | 0.473 | neutral | None | None | None | None | N |
K/C | 0.6017 | likely_pathogenic | 0.6318 | pathogenic | -1.246 | Destabilizing | 0.991 | D | 0.655 | neutral | None | None | None | None | N |
K/D | 0.8687 | likely_pathogenic | 0.8628 | pathogenic | -0.803 | Destabilizing | 0.39 | N | 0.546 | neutral | None | None | None | None | N |
K/E | 0.3224 | likely_benign | 0.2919 | benign | -0.613 | Destabilizing | 0.491 | N | 0.537 | neutral | N | 0.509723219 | None | None | N |
K/F | 0.7504 | likely_pathogenic | 0.7405 | pathogenic | -0.563 | Destabilizing | 0.901 | D | 0.661 | neutral | None | None | None | None | N |
K/G | 0.7709 | likely_pathogenic | 0.7591 | pathogenic | -1.472 | Destabilizing | 0.39 | N | 0.598 | neutral | None | None | None | None | N |
K/H | 0.2646 | likely_benign | 0.2779 | benign | -1.708 | Destabilizing | 0.901 | D | 0.598 | neutral | None | None | None | None | N |
K/I | 0.2592 | likely_benign | 0.2459 | benign | 0.103 | Stabilizing | 0.013 | N | 0.494 | neutral | N | 0.48678288 | None | None | N |
K/L | 0.395 | ambiguous | 0.383 | ambiguous | 0.103 | Stabilizing | 0.209 | N | 0.497 | neutral | None | None | None | None | N |
K/M | 0.2378 | likely_benign | 0.2234 | benign | -0.118 | Destabilizing | 0.901 | D | 0.605 | neutral | None | None | None | None | N |
K/N | 0.6145 | likely_pathogenic | 0.569 | pathogenic | -1.119 | Destabilizing | 0.003 | N | 0.268 | neutral | D | 0.536256031 | None | None | N |
K/P | 0.9902 | likely_pathogenic | 0.9918 | pathogenic | -0.253 | Destabilizing | 0.965 | D | 0.609 | neutral | None | None | None | None | N |
K/Q | 0.1543 | likely_benign | 0.1454 | benign | -1.072 | Destabilizing | 0.772 | D | 0.567 | neutral | N | 0.507958615 | None | None | N |
K/R | 0.0845 | likely_benign | 0.0889 | benign | -0.881 | Destabilizing | 0.491 | N | 0.473 | neutral | N | 0.477044254 | None | None | N |
K/S | 0.5694 | likely_pathogenic | 0.5483 | ambiguous | -1.808 | Destabilizing | 0.209 | N | 0.515 | neutral | None | None | None | None | N |
K/T | 0.1714 | likely_benign | 0.16 | benign | -1.383 | Destabilizing | 0.013 | N | 0.3 | neutral | N | 0.446955243 | None | None | N |
K/V | 0.2864 | likely_benign | 0.2826 | benign | -0.253 | Destabilizing | 0.007 | N | 0.466 | neutral | None | None | None | None | N |
K/W | 0.7509 | likely_pathogenic | 0.7941 | pathogenic | -0.448 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/Y | 0.5769 | likely_pathogenic | 0.5888 | pathogenic | -0.118 | Destabilizing | 0.965 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.