Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14200 | 42823;42824;42825 | chr2:178633901;178633900;178633899 | chr2:179498628;179498627;179498626 |
N2AB | 12559 | 37900;37901;37902 | chr2:178633901;178633900;178633899 | chr2:179498628;179498627;179498626 |
N2A | 11632 | 35119;35120;35121 | chr2:178633901;178633900;178633899 | chr2:179498628;179498627;179498626 |
N2B | 5135 | 15628;15629;15630 | chr2:178633901;178633900;178633899 | chr2:179498628;179498627;179498626 |
Novex-1 | 5260 | 16003;16004;16005 | chr2:178633901;178633900;178633899 | chr2:179498628;179498627;179498626 |
Novex-2 | 5327 | 16204;16205;16206 | chr2:178633901;178633900;178633899 | chr2:179498628;179498627;179498626 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/R | None | None | 0.106 | N | 0.719 | 0.529 | 0.635165634531 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.9409 | likely_pathogenic | 0.949 | pathogenic | -2.639 | Highly Destabilizing | 0.014 | N | 0.544 | neutral | None | None | None | None | N |
M/C | 0.9256 | likely_pathogenic | 0.9406 | pathogenic | -2.629 | Highly Destabilizing | 0.628 | D | 0.721 | prob.delet. | None | None | None | None | N |
M/D | 0.995 | likely_pathogenic | 0.9967 | pathogenic | -1.838 | Destabilizing | 0.356 | N | 0.789 | deleterious | None | None | None | None | N |
M/E | 0.9552 | likely_pathogenic | 0.9671 | pathogenic | -1.65 | Destabilizing | 0.136 | N | 0.723 | prob.delet. | None | None | None | None | N |
M/F | 0.367 | ambiguous | 0.3702 | ambiguous | -1.111 | Destabilizing | 0.072 | N | 0.568 | neutral | None | None | None | None | N |
M/G | 0.9799 | likely_pathogenic | 0.9869 | pathogenic | -3.121 | Highly Destabilizing | 0.136 | N | 0.737 | prob.delet. | None | None | None | None | N |
M/H | 0.9464 | likely_pathogenic | 0.9586 | pathogenic | -2.401 | Highly Destabilizing | 0.628 | D | 0.775 | deleterious | None | None | None | None | N |
M/I | 0.2829 | likely_benign | 0.2649 | benign | -1.269 | Destabilizing | None | N | 0.298 | neutral | N | 0.286285887 | None | None | N |
M/K | 0.8151 | likely_pathogenic | 0.8461 | pathogenic | -1.564 | Destabilizing | 0.106 | N | 0.632 | neutral | N | 0.512000938 | None | None | N |
M/L | 0.1796 | likely_benign | 0.1751 | benign | -1.269 | Destabilizing | None | N | 0.283 | neutral | N | 0.425906051 | None | None | N |
M/N | 0.9639 | likely_pathogenic | 0.9708 | pathogenic | -1.789 | Destabilizing | 0.628 | D | 0.771 | deleterious | None | None | None | None | N |
M/P | 0.9975 | likely_pathogenic | 0.9982 | pathogenic | -1.705 | Destabilizing | 0.628 | D | 0.773 | deleterious | None | None | None | None | N |
M/Q | 0.835 | likely_pathogenic | 0.8632 | pathogenic | -1.585 | Destabilizing | 0.628 | D | 0.656 | neutral | None | None | None | None | N |
M/R | 0.8246 | likely_pathogenic | 0.8532 | pathogenic | -1.429 | Destabilizing | 0.106 | N | 0.719 | prob.delet. | N | 0.512000938 | None | None | N |
M/S | 0.9625 | likely_pathogenic | 0.9689 | pathogenic | -2.494 | Highly Destabilizing | 0.136 | N | 0.623 | neutral | None | None | None | None | N |
M/T | 0.8846 | likely_pathogenic | 0.9056 | pathogenic | -2.166 | Highly Destabilizing | 0.024 | N | 0.615 | neutral | N | 0.511490213 | None | None | N |
M/V | 0.1993 | likely_benign | 0.2026 | benign | -1.705 | Destabilizing | 0.001 | N | 0.345 | neutral | N | 0.435452602 | None | None | N |
M/W | 0.7712 | likely_pathogenic | 0.8133 | pathogenic | -1.247 | Destabilizing | 0.864 | D | 0.715 | prob.delet. | None | None | None | None | N |
M/Y | 0.7587 | likely_pathogenic | 0.8013 | pathogenic | -1.313 | Destabilizing | 0.356 | N | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.