Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14203 | 42832;42833;42834 | chr2:178633892;178633891;178633890 | chr2:179498619;179498618;179498617 |
N2AB | 12562 | 37909;37910;37911 | chr2:178633892;178633891;178633890 | chr2:179498619;179498618;179498617 |
N2A | 11635 | 35128;35129;35130 | chr2:178633892;178633891;178633890 | chr2:179498619;179498618;179498617 |
N2B | 5138 | 15637;15638;15639 | chr2:178633892;178633891;178633890 | chr2:179498619;179498618;179498617 |
Novex-1 | 5263 | 16012;16013;16014 | chr2:178633892;178633891;178633890 | chr2:179498619;179498618;179498617 |
Novex-2 | 5330 | 16213;16214;16215 | chr2:178633892;178633891;178633890 | chr2:179498619;179498618;179498617 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs761861743 | -1.278 | 0.638 | D | 0.591 | 0.456 | 0.693830937314 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/M | rs761861743 | -1.278 | 0.638 | D | 0.591 | 0.456 | 0.693830937314 | gnomAD-4.0.0 | 1.592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6774 | likely_pathogenic | 0.6666 | pathogenic | -1.868 | Destabilizing | 0.094 | N | 0.532 | neutral | N | 0.513027114 | None | None | N |
V/C | 0.9453 | likely_pathogenic | 0.9474 | pathogenic | -1.894 | Destabilizing | 0.947 | D | 0.654 | neutral | None | None | None | None | N |
V/D | 0.9852 | likely_pathogenic | 0.9896 | pathogenic | -3.1 | Highly Destabilizing | 0.7 | D | 0.753 | deleterious | None | None | None | None | N |
V/E | 0.9748 | likely_pathogenic | 0.9808 | pathogenic | -3.04 | Highly Destabilizing | 0.638 | D | 0.711 | prob.delet. | D | 0.69058275 | None | None | N |
V/F | 0.8555 | likely_pathogenic | 0.875 | pathogenic | -1.4 | Destabilizing | 0.7 | D | 0.706 | prob.neutral | None | None | None | None | N |
V/G | 0.7736 | likely_pathogenic | 0.7911 | pathogenic | -2.218 | Highly Destabilizing | 0.638 | D | 0.729 | prob.delet. | D | 0.69058275 | None | None | N |
V/H | 0.9943 | likely_pathogenic | 0.9956 | pathogenic | -1.682 | Destabilizing | 0.982 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/I | 0.1472 | likely_benign | 0.1435 | benign | -0.955 | Destabilizing | 0.121 | N | 0.534 | neutral | None | None | None | None | N |
V/K | 0.9758 | likely_pathogenic | 0.9832 | pathogenic | -1.672 | Destabilizing | 0.7 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/L | 0.5158 | ambiguous | 0.5244 | ambiguous | -0.955 | Destabilizing | 0.002 | N | 0.327 | neutral | D | 0.523363222 | None | None | N |
V/M | 0.5812 | likely_pathogenic | 0.5934 | pathogenic | -1.012 | Destabilizing | 0.638 | D | 0.591 | neutral | D | 0.689505241 | None | None | N |
V/N | 0.9484 | likely_pathogenic | 0.9588 | pathogenic | -1.847 | Destabilizing | 0.7 | D | 0.745 | deleterious | None | None | None | None | N |
V/P | 0.9575 | likely_pathogenic | 0.9792 | pathogenic | -1.232 | Destabilizing | 0.826 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/Q | 0.9788 | likely_pathogenic | 0.9836 | pathogenic | -2.004 | Highly Destabilizing | 0.826 | D | 0.708 | prob.delet. | None | None | None | None | N |
V/R | 0.9677 | likely_pathogenic | 0.9766 | pathogenic | -1.159 | Destabilizing | 0.7 | D | 0.747 | deleterious | None | None | None | None | N |
V/S | 0.9154 | likely_pathogenic | 0.9154 | pathogenic | -2.261 | Highly Destabilizing | 0.539 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/T | 0.7499 | likely_pathogenic | 0.7467 | pathogenic | -2.097 | Highly Destabilizing | 0.002 | N | 0.389 | neutral | None | None | None | None | N |
V/W | 0.9971 | likely_pathogenic | 0.9979 | pathogenic | -1.713 | Destabilizing | 0.982 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/Y | 0.9823 | likely_pathogenic | 0.9867 | pathogenic | -1.408 | Destabilizing | 0.826 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.