Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14223 | 42892;42893;42894 | chr2:178633832;178633831;178633830 | chr2:179498559;179498558;179498557 |
N2AB | 12582 | 37969;37970;37971 | chr2:178633832;178633831;178633830 | chr2:179498559;179498558;179498557 |
N2A | 11655 | 35188;35189;35190 | chr2:178633832;178633831;178633830 | chr2:179498559;179498558;179498557 |
N2B | 5158 | 15697;15698;15699 | chr2:178633832;178633831;178633830 | chr2:179498559;179498558;179498557 |
Novex-1 | 5283 | 16072;16073;16074 | chr2:178633832;178633831;178633830 | chr2:179498559;179498558;179498557 |
Novex-2 | 5350 | 16273;16274;16275 | chr2:178633832;178633831;178633830 | chr2:179498559;179498558;179498557 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs371287021 | -0.645 | None | N | 0.131 | 0.081 | 0.0138822411134 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1538 | likely_benign | 0.1189 | benign | -0.657 | Destabilizing | 0.014 | N | 0.287 | neutral | None | None | None | None | N |
Q/C | 0.3703 | ambiguous | 0.2703 | benign | -0.107 | Destabilizing | 0.864 | D | 0.468 | neutral | None | None | None | None | N |
Q/D | 0.1885 | likely_benign | 0.1507 | benign | -0.747 | Destabilizing | 0.007 | N | 0.247 | neutral | None | None | None | None | N |
Q/E | 0.0809 | likely_benign | 0.0794 | benign | -0.653 | Destabilizing | 0.005 | N | 0.195 | neutral | N | 0.43096717 | None | None | N |
Q/F | 0.3435 | ambiguous | 0.2941 | benign | -0.434 | Destabilizing | 0.214 | N | 0.545 | neutral | None | None | None | None | N |
Q/G | 0.2139 | likely_benign | 0.1822 | benign | -1.006 | Destabilizing | 0.007 | N | 0.277 | neutral | None | None | None | None | N |
Q/H | 0.0903 | likely_benign | 0.0654 | benign | -0.918 | Destabilizing | None | N | 0.131 | neutral | N | 0.441145034 | None | None | N |
Q/I | 0.2282 | likely_benign | 0.1754 | benign | 0.229 | Stabilizing | 0.136 | N | 0.543 | neutral | None | None | None | None | N |
Q/K | 0.0713 | likely_benign | 0.0682 | benign | -0.309 | Destabilizing | None | N | 0.119 | neutral | N | 0.403906856 | None | None | N |
Q/L | 0.0935 | likely_benign | 0.073 | benign | 0.229 | Stabilizing | 0.024 | N | 0.385 | neutral | N | 0.448370922 | None | None | N |
Q/M | 0.2509 | likely_benign | 0.1947 | benign | 0.689 | Stabilizing | 0.628 | D | 0.399 | neutral | None | None | None | None | N |
Q/N | 0.0912 | likely_benign | 0.0515 | benign | -0.904 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | N |
Q/P | 0.2131 | likely_benign | 0.2015 | benign | -0.035 | Destabilizing | 0.106 | N | 0.453 | neutral | N | 0.444769971 | None | None | N |
Q/R | 0.0846 | likely_benign | 0.0801 | benign | -0.247 | Destabilizing | 0.012 | N | 0.302 | neutral | N | 0.398772765 | None | None | N |
Q/S | 0.1229 | likely_benign | 0.0913 | benign | -0.984 | Destabilizing | 0.007 | N | 0.22 | neutral | None | None | None | None | N |
Q/T | 0.1185 | likely_benign | 0.0889 | benign | -0.694 | Destabilizing | 0.016 | N | 0.344 | neutral | None | None | None | None | N |
Q/V | 0.1573 | likely_benign | 0.1253 | benign | -0.035 | Destabilizing | 0.136 | N | 0.463 | neutral | None | None | None | None | N |
Q/W | 0.2995 | likely_benign | 0.2847 | benign | -0.307 | Destabilizing | 0.864 | D | 0.479 | neutral | None | None | None | None | N |
Q/Y | 0.1821 | likely_benign | 0.1432 | benign | -0.061 | Destabilizing | 0.038 | N | 0.45 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.