Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14243 | 42952;42953;42954 | chr2:178633632;178633631;178633630 | chr2:179498359;179498358;179498357 |
N2AB | 12602 | 38029;38030;38031 | chr2:178633632;178633631;178633630 | chr2:179498359;179498358;179498357 |
N2A | 11675 | 35248;35249;35250 | chr2:178633632;178633631;178633630 | chr2:179498359;179498358;179498357 |
N2B | 5178 | 15757;15758;15759 | chr2:178633632;178633631;178633630 | chr2:179498359;179498358;179498357 |
Novex-1 | 5303 | 16132;16133;16134 | chr2:178633632;178633631;178633630 | chr2:179498359;179498358;179498357 |
Novex-2 | 5370 | 16333;16334;16335 | chr2:178633632;178633631;178633630 | chr2:179498359;179498358;179498357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.782 | N | 0.538 | 0.208 | 0.550005317886 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1853 | likely_benign | 0.1619 | benign | -1.443 | Destabilizing | 0.174 | N | 0.372 | neutral | N | 0.504968066 | None | None | N |
V/C | 0.8112 | likely_pathogenic | 0.7865 | pathogenic | -0.922 | Destabilizing | 0.973 | D | 0.484 | neutral | None | None | None | None | N |
V/D | 0.4638 | ambiguous | 0.3866 | ambiguous | -1.496 | Destabilizing | 0.826 | D | 0.573 | neutral | None | None | None | None | N |
V/E | 0.3348 | likely_benign | 0.2939 | benign | -1.553 | Destabilizing | 0.782 | D | 0.538 | neutral | N | 0.504858086 | None | None | N |
V/F | 0.2435 | likely_benign | 0.1713 | benign | -1.316 | Destabilizing | 0.826 | D | 0.465 | neutral | None | None | None | None | N |
V/G | 0.2694 | likely_benign | 0.2231 | benign | -1.699 | Destabilizing | 0.782 | D | 0.534 | neutral | D | 0.592790785 | None | None | N |
V/H | 0.6564 | likely_pathogenic | 0.6083 | pathogenic | -1.204 | Destabilizing | 0.991 | D | 0.592 | neutral | None | None | None | None | N |
V/I | 0.0848 | likely_benign | 0.0784 | benign | -0.855 | Destabilizing | 0.004 | N | 0.229 | neutral | None | None | None | None | N |
V/K | 0.3194 | likely_benign | 0.295 | benign | -1.171 | Destabilizing | 0.826 | D | 0.534 | neutral | None | None | None | None | N |
V/L | 0.2154 | likely_benign | 0.1897 | benign | -0.855 | Destabilizing | 0.003 | N | 0.262 | neutral | N | 0.500876099 | None | None | N |
V/M | 0.1618 | likely_benign | 0.1322 | benign | -0.563 | Destabilizing | 0.782 | D | 0.448 | neutral | N | 0.50574142 | None | None | N |
V/N | 0.2947 | likely_benign | 0.2676 | benign | -0.882 | Destabilizing | 0.826 | D | 0.58 | neutral | None | None | None | None | N |
V/P | 0.4975 | ambiguous | 0.5455 | ambiguous | -1.017 | Destabilizing | 0.906 | D | 0.558 | neutral | None | None | None | None | N |
V/Q | 0.3259 | likely_benign | 0.3149 | benign | -1.169 | Destabilizing | 0.906 | D | 0.567 | neutral | None | None | None | None | N |
V/R | 0.309 | likely_benign | 0.2647 | benign | -0.544 | Destabilizing | 0.826 | D | 0.581 | neutral | None | None | None | None | N |
V/S | 0.2235 | likely_benign | 0.1963 | benign | -1.317 | Destabilizing | 0.404 | N | 0.477 | neutral | None | None | None | None | N |
V/T | 0.137 | likely_benign | 0.1319 | benign | -1.281 | Destabilizing | 0.004 | N | 0.227 | neutral | None | None | None | None | N |
V/W | 0.8574 | likely_pathogenic | 0.799 | pathogenic | -1.423 | Destabilizing | 0.991 | D | 0.618 | neutral | None | None | None | None | N |
V/Y | 0.6663 | likely_pathogenic | 0.5949 | pathogenic | -1.166 | Destabilizing | 0.906 | D | 0.457 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.