Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14252 | 42979;42980;42981 | chr2:178633605;178633604;178633603 | chr2:179498332;179498331;179498330 |
N2AB | 12611 | 38056;38057;38058 | chr2:178633605;178633604;178633603 | chr2:179498332;179498331;179498330 |
N2A | 11684 | 35275;35276;35277 | chr2:178633605;178633604;178633603 | chr2:179498332;179498331;179498330 |
N2B | 5187 | 15784;15785;15786 | chr2:178633605;178633604;178633603 | chr2:179498332;179498331;179498330 |
Novex-1 | 5312 | 16159;16160;16161 | chr2:178633605;178633604;178633603 | chr2:179498332;179498331;179498330 |
Novex-2 | 5379 | 16360;16361;16362 | chr2:178633605;178633604;178633603 | chr2:179498332;179498331;179498330 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs1372237054 | -2.542 | 0.97 | D | 0.859 | 0.571 | 0.699194967022 | gnomAD-2.1.1 | 4.04E-06 | None | None | disulfide | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
C/G | rs1372237054 | -2.542 | 0.97 | D | 0.859 | 0.571 | 0.699194967022 | gnomAD-3.1.2 | 1.31E-05 | None | None | disulfide | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
C/G | rs1372237054 | -2.542 | 0.97 | D | 0.859 | 0.571 | 0.699194967022 | gnomAD-4.0.0 | 5.57904E-06 | None | None | disulfide | None | N | None | 1.06812E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47746E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6123 | likely_pathogenic | 0.6506 | pathogenic | -1.481 | Destabilizing | 0.717 | D | 0.666 | neutral | None | None | disulfide | None | N |
C/D | 0.9962 | likely_pathogenic | 0.996 | pathogenic | -1.712 | Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | disulfide | None | N |
C/E | 0.998 | likely_pathogenic | 0.9979 | pathogenic | -1.463 | Destabilizing | 0.978 | D | 0.88 | deleterious | None | None | disulfide | None | N |
C/F | 0.9365 | likely_pathogenic | 0.8903 | pathogenic | -0.866 | Destabilizing | 0.89 | D | 0.846 | deleterious | D | 0.723625681 | disulfide | None | N |
C/G | 0.575 | likely_pathogenic | 0.5327 | ambiguous | -1.837 | Destabilizing | 0.97 | D | 0.859 | deleterious | D | 0.738562012 | disulfide | None | N |
C/H | 0.996 | likely_pathogenic | 0.9952 | pathogenic | -2.055 | Highly Destabilizing | 0.988 | D | 0.883 | deleterious | None | None | disulfide | None | N |
C/I | 0.8084 | likely_pathogenic | 0.7537 | pathogenic | -0.51 | Destabilizing | 0.956 | D | 0.815 | deleterious | None | None | disulfide | None | N |
C/K | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -1.18 | Destabilizing | 0.978 | D | 0.883 | deleterious | None | None | disulfide | None | N |
C/L | 0.8632 | likely_pathogenic | 0.8068 | pathogenic | -0.51 | Destabilizing | 0.754 | D | 0.742 | deleterious | None | None | disulfide | None | N |
C/M | 0.9193 | likely_pathogenic | 0.9035 | pathogenic | 0.142 | Stabilizing | 0.998 | D | 0.783 | deleterious | None | None | disulfide | None | N |
C/N | 0.9813 | likely_pathogenic | 0.9787 | pathogenic | -1.89 | Destabilizing | 0.978 | D | 0.877 | deleterious | None | None | disulfide | None | N |
C/P | 0.9981 | likely_pathogenic | 0.9979 | pathogenic | -0.813 | Destabilizing | 0.993 | D | 0.868 | deleterious | None | None | disulfide | None | N |
C/Q | 0.9962 | likely_pathogenic | 0.9962 | pathogenic | -1.368 | Destabilizing | 0.978 | D | 0.873 | deleterious | None | None | disulfide | None | N |
C/R | 0.9942 | likely_pathogenic | 0.9932 | pathogenic | -1.619 | Destabilizing | 0.97 | D | 0.868 | deleterious | D | 0.792690354 | disulfide | None | N |
C/S | 0.7425 | likely_pathogenic | 0.7554 | pathogenic | -2.132 | Highly Destabilizing | 0.904 | D | 0.803 | deleterious | D | 0.723625681 | disulfide | None | N |
C/T | 0.7175 | likely_pathogenic | 0.7473 | pathogenic | -1.706 | Destabilizing | 0.978 | D | 0.807 | deleterious | None | None | disulfide | None | N |
C/V | 0.5303 | ambiguous | 0.5166 | ambiguous | -0.813 | Destabilizing | 0.86 | D | 0.78 | deleterious | None | None | disulfide | None | N |
C/W | 0.9918 | likely_pathogenic | 0.9874 | pathogenic | -1.349 | Destabilizing | 0.992 | D | 0.864 | deleterious | D | 0.792690354 | disulfide | None | N |
C/Y | 0.9794 | likely_pathogenic | 0.9647 | pathogenic | -1.111 | Destabilizing | 0.014 | N | 0.694 | prob.neutral | D | 0.791550777 | disulfide | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.