Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14271 | 43036;43037;43038 | chr2:178633548;178633547;178633546 | chr2:179498275;179498274;179498273 |
N2AB | 12630 | 38113;38114;38115 | chr2:178633548;178633547;178633546 | chr2:179498275;179498274;179498273 |
N2A | 11703 | 35332;35333;35334 | chr2:178633548;178633547;178633546 | chr2:179498275;179498274;179498273 |
N2B | 5206 | 15841;15842;15843 | chr2:178633548;178633547;178633546 | chr2:179498275;179498274;179498273 |
Novex-1 | 5331 | 16216;16217;16218 | chr2:178633548;178633547;178633546 | chr2:179498275;179498274;179498273 |
Novex-2 | 5398 | 16417;16418;16419 | chr2:178633548;178633547;178633546 | chr2:179498275;179498274;179498273 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.684 | D | 0.353 | 0.337 | 0.64185220107 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0639 | likely_benign | 0.058 | benign | -0.503 | Destabilizing | 0.001 | N | 0.115 | neutral | N | 0.494041351 | None | None | N |
P/C | 0.609 | likely_pathogenic | 0.506 | ambiguous | -0.781 | Destabilizing | 0.987 | D | 0.389 | neutral | None | None | None | None | N |
P/D | 0.4054 | ambiguous | 0.345 | ambiguous | -0.187 | Destabilizing | 0.742 | D | 0.357 | neutral | None | None | None | None | N |
P/E | 0.3 | likely_benign | 0.2418 | benign | -0.278 | Destabilizing | 0.742 | D | 0.275 | neutral | None | None | None | None | N |
P/F | 0.5255 | ambiguous | 0.3883 | ambiguous | -0.629 | Destabilizing | 0.953 | D | 0.405 | neutral | None | None | None | None | N |
P/G | 0.2627 | likely_benign | 0.2628 | benign | -0.644 | Destabilizing | 0.373 | N | 0.277 | neutral | None | None | None | None | N |
P/H | 0.2431 | likely_benign | 0.1818 | benign | -0.158 | Destabilizing | 0.994 | D | 0.369 | neutral | D | 0.637839969 | None | None | N |
P/I | 0.3626 | ambiguous | 0.2372 | benign | -0.273 | Destabilizing | 0.91 | D | 0.401 | neutral | None | None | None | None | N |
P/K | 0.3281 | likely_benign | 0.2662 | benign | -0.503 | Destabilizing | 0.742 | D | 0.273 | neutral | None | None | None | None | N |
P/L | 0.1533 | likely_benign | 0.1082 | benign | -0.273 | Destabilizing | 0.684 | D | 0.353 | neutral | D | 0.533365599 | None | None | N |
P/M | 0.3881 | ambiguous | 0.287 | benign | -0.471 | Destabilizing | 0.984 | D | 0.367 | neutral | None | None | None | None | N |
P/N | 0.2945 | likely_benign | 0.2552 | benign | -0.342 | Destabilizing | 0.91 | D | 0.381 | neutral | None | None | None | None | N |
P/Q | 0.1779 | likely_benign | 0.1421 | benign | -0.52 | Destabilizing | 0.91 | D | 0.373 | neutral | None | None | None | None | N |
P/R | 0.2461 | likely_benign | 0.188 | benign | -0.036 | Destabilizing | 0.884 | D | 0.379 | neutral | D | 0.533453912 | None | None | N |
P/S | 0.1077 | likely_benign | 0.095 | benign | -0.724 | Destabilizing | 0.028 | N | 0.185 | neutral | N | 0.502086567 | None | None | N |
P/T | 0.1213 | likely_benign | 0.0873 | benign | -0.707 | Destabilizing | 0.028 | N | 0.179 | neutral | D | 0.538164761 | None | None | N |
P/V | 0.2362 | likely_benign | 0.1714 | benign | -0.316 | Destabilizing | 0.59 | D | 0.323 | neutral | None | None | None | None | N |
P/W | 0.7541 | likely_pathogenic | 0.6466 | pathogenic | -0.719 | Destabilizing | 0.996 | D | 0.481 | neutral | None | None | None | None | N |
P/Y | 0.486 | ambiguous | 0.3792 | ambiguous | -0.431 | Destabilizing | 0.984 | D | 0.396 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.