Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14302 | 43129;43130;43131 | chr2:178633455;178633454;178633453 | chr2:179498182;179498181;179498180 |
N2AB | 12661 | 38206;38207;38208 | chr2:178633455;178633454;178633453 | chr2:179498182;179498181;179498180 |
N2A | 11734 | 35425;35426;35427 | chr2:178633455;178633454;178633453 | chr2:179498182;179498181;179498180 |
N2B | 5237 | 15934;15935;15936 | chr2:178633455;178633454;178633453 | chr2:179498182;179498181;179498180 |
Novex-1 | 5362 | 16309;16310;16311 | chr2:178633455;178633454;178633453 | chr2:179498182;179498181;179498180 |
Novex-2 | 5429 | 16510;16511;16512 | chr2:178633455;178633454;178633453 | chr2:179498182;179498181;179498180 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.955 | D | 0.7 | 0.373 | 0.403609169532 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/N | None | None | 0.977 | N | 0.733 | 0.292 | 0.347659731818 | gnomAD-4.0.0 | 1.59235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4152 | ambiguous | 0.408 | ambiguous | -0.209 | Destabilizing | 0.955 | D | 0.729 | prob.delet. | N | 0.50917099 | None | None | N |
D/C | 0.8581 | likely_pathogenic | 0.8271 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
D/E | 0.4371 | ambiguous | 0.4142 | ambiguous | -0.477 | Destabilizing | 0.977 | D | 0.571 | neutral | N | 0.487524179 | None | None | N |
D/F | 0.7963 | likely_pathogenic | 0.7846 | pathogenic | 0.334 | Stabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
D/G | 0.585 | likely_pathogenic | 0.5914 | pathogenic | -0.668 | Destabilizing | 0.955 | D | 0.7 | prob.neutral | D | 0.652660443 | None | None | N |
D/H | 0.5182 | ambiguous | 0.5264 | ambiguous | -0.026 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.538208368 | None | None | N |
D/I | 0.5319 | ambiguous | 0.5056 | ambiguous | 1.039 | Stabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
D/K | 0.7788 | likely_pathogenic | 0.7712 | pathogenic | -0.303 | Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | N |
D/L | 0.6358 | likely_pathogenic | 0.621 | pathogenic | 1.039 | Stabilizing | 0.995 | D | 0.851 | deleterious | None | None | None | None | N |
D/M | 0.8441 | likely_pathogenic | 0.831 | pathogenic | 1.577 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
D/N | 0.1387 | likely_benign | 0.1314 | benign | -0.86 | Destabilizing | 0.977 | D | 0.733 | prob.delet. | N | 0.503171115 | None | None | N |
D/P | 0.9841 | likely_pathogenic | 0.9858 | pathogenic | 0.65 | Stabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
D/Q | 0.6992 | likely_pathogenic | 0.6887 | pathogenic | -0.549 | Destabilizing | 0.998 | D | 0.78 | deleterious | None | None | None | None | N |
D/R | 0.7535 | likely_pathogenic | 0.7589 | pathogenic | -0.294 | Destabilizing | 0.995 | D | 0.887 | deleterious | None | None | None | None | N |
D/S | 0.2379 | likely_benign | 0.2334 | benign | -1.297 | Destabilizing | 0.635 | D | 0.341 | neutral | None | None | None | None | N |
D/T | 0.4908 | ambiguous | 0.4786 | ambiguous | -0.883 | Destabilizing | 0.99 | D | 0.791 | deleterious | None | None | None | None | N |
D/V | 0.3732 | ambiguous | 0.3444 | ambiguous | 0.65 | Stabilizing | 0.993 | D | 0.854 | deleterious | N | 0.475347172 | None | None | N |
D/W | 0.9658 | likely_pathogenic | 0.9671 | pathogenic | 0.367 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
D/Y | 0.395 | ambiguous | 0.3762 | ambiguous | 0.586 | Stabilizing | 1.0 | D | 0.873 | deleterious | D | 0.558243328 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.