Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14330 | 43213;43214;43215 | chr2:178633285;178633284;178633283 | chr2:179498012;179498011;179498010 |
N2AB | 12689 | 38290;38291;38292 | chr2:178633285;178633284;178633283 | chr2:179498012;179498011;179498010 |
N2A | 11762 | 35509;35510;35511 | chr2:178633285;178633284;178633283 | chr2:179498012;179498011;179498010 |
N2B | 5265 | 16018;16019;16020 | chr2:178633285;178633284;178633283 | chr2:179498012;179498011;179498010 |
Novex-1 | 5390 | 16393;16394;16395 | chr2:178633285;178633284;178633283 | chr2:179498012;179498011;179498010 |
Novex-2 | 5457 | 16594;16595;16596 | chr2:178633285;178633284;178633283 | chr2:179498012;179498011;179498010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs2060028411 | None | 0.005 | D | 0.441 | 0.169 | 0.0611884634855 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/M | rs2060028411 | None | 0.005 | D | 0.441 | 0.169 | 0.0611884634855 | gnomAD-4.0.0 | 6.57445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4708E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4644 | ambiguous | 0.4245 | ambiguous | -1.968 | Destabilizing | 0.025 | N | 0.443 | neutral | N | 0.425901956 | None | None | N |
V/C | 0.827 | likely_pathogenic | 0.7674 | pathogenic | -1.333 | Destabilizing | 0.869 | D | 0.542 | neutral | None | None | None | None | N |
V/D | 0.8785 | likely_pathogenic | 0.8591 | pathogenic | -2.366 | Highly Destabilizing | 0.637 | D | 0.739 | deleterious | None | None | None | None | N |
V/E | 0.7858 | likely_pathogenic | 0.777 | pathogenic | -2.221 | Highly Destabilizing | 0.303 | N | 0.641 | neutral | D | 0.62920156 | None | None | N |
V/F | 0.5276 | ambiguous | 0.5088 | ambiguous | -1.213 | Destabilizing | 0.125 | N | 0.697 | prob.delet. | None | None | None | None | N |
V/G | 0.5005 | ambiguous | 0.4707 | ambiguous | -2.423 | Highly Destabilizing | 0.303 | N | 0.719 | prob.delet. | D | 0.590850684 | None | None | N |
V/H | 0.9326 | likely_pathogenic | 0.9072 | pathogenic | -2.09 | Highly Destabilizing | 0.869 | D | 0.637 | neutral | None | None | None | None | N |
V/I | 0.1158 | likely_benign | 0.1057 | benign | -0.735 | Destabilizing | 0.001 | N | 0.213 | neutral | None | None | None | None | N |
V/K | 0.7607 | likely_pathogenic | 0.7197 | pathogenic | -1.61 | Destabilizing | 0.221 | N | 0.661 | prob.neutral | None | None | None | None | N |
V/L | 0.2559 | likely_benign | 0.17 | benign | -0.735 | Destabilizing | None | N | 0.095 | neutral | N | 0.437243363 | None | None | N |
V/M | 0.3777 | ambiguous | 0.3404 | ambiguous | -0.669 | Destabilizing | 0.005 | N | 0.441 | neutral | D | 0.630126083 | None | None | N |
V/N | 0.7498 | likely_pathogenic | 0.7096 | pathogenic | -1.712 | Destabilizing | 0.366 | N | 0.732 | deleterious | None | None | None | None | N |
V/P | 0.9604 | likely_pathogenic | 0.9514 | pathogenic | -1.117 | Destabilizing | 0.637 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/Q | 0.7879 | likely_pathogenic | 0.7504 | pathogenic | -1.687 | Destabilizing | 0.366 | N | 0.661 | prob.neutral | None | None | None | None | N |
V/R | 0.6928 | likely_pathogenic | 0.6379 | pathogenic | -1.28 | Destabilizing | 0.366 | N | 0.741 | deleterious | None | None | None | None | N |
V/S | 0.6516 | likely_pathogenic | 0.6248 | pathogenic | -2.288 | Highly Destabilizing | 0.075 | N | 0.639 | neutral | None | None | None | None | N |
V/T | 0.4691 | ambiguous | 0.434 | ambiguous | -2.026 | Highly Destabilizing | 0.075 | N | 0.563 | neutral | None | None | None | None | N |
V/W | 0.9643 | likely_pathogenic | 0.9431 | pathogenic | -1.663 | Destabilizing | 0.869 | D | 0.663 | prob.neutral | None | None | None | None | N |
V/Y | 0.8685 | likely_pathogenic | 0.834 | pathogenic | -1.312 | Destabilizing | 0.366 | N | 0.699 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.