Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14355 | 43288;43289;43290 | chr2:178633210;178633209;178633208 | chr2:179497937;179497936;179497935 |
N2AB | 12714 | 38365;38366;38367 | chr2:178633210;178633209;178633208 | chr2:179497937;179497936;179497935 |
N2A | 11787 | 35584;35585;35586 | chr2:178633210;178633209;178633208 | chr2:179497937;179497936;179497935 |
N2B | 5290 | 16093;16094;16095 | chr2:178633210;178633209;178633208 | chr2:179497937;179497936;179497935 |
Novex-1 | 5415 | 16468;16469;16470 | chr2:178633210;178633209;178633208 | chr2:179497937;179497936;179497935 |
Novex-2 | 5482 | 16669;16670;16671 | chr2:178633210;178633209;178633208 | chr2:179497937;179497936;179497935 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 0.974 | D | 0.763 | 0.366 | 0.28722502521 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5274 | ambiguous | 0.4531 | ambiguous | -0.437 | Destabilizing | 0.071 | N | 0.319 | neutral | D | 0.667199307 | None | None | N |
G/C | 0.6966 | likely_pathogenic | 0.6492 | pathogenic | -0.945 | Destabilizing | 0.997 | D | 0.764 | deleterious | None | None | None | None | N |
G/D | 0.2015 | likely_benign | 0.1703 | benign | -0.87 | Destabilizing | 0.99 | D | 0.738 | deleterious | None | None | None | None | N |
G/E | 0.3797 | ambiguous | 0.3101 | benign | -1.027 | Destabilizing | 0.974 | D | 0.763 | deleterious | D | 0.585329919 | None | None | N |
G/F | 0.9409 | likely_pathogenic | 0.9129 | pathogenic | -1.075 | Destabilizing | 0.997 | D | 0.823 | deleterious | None | None | None | None | N |
G/H | 0.7959 | likely_pathogenic | 0.7354 | pathogenic | -0.675 | Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
G/I | 0.8687 | likely_pathogenic | 0.8018 | pathogenic | -0.517 | Destabilizing | 0.98 | D | 0.821 | deleterious | None | None | None | None | N |
G/K | 0.8302 | likely_pathogenic | 0.7626 | pathogenic | -1.079 | Destabilizing | 0.961 | D | 0.723 | deleterious | None | None | None | None | N |
G/L | 0.8883 | likely_pathogenic | 0.8424 | pathogenic | -0.517 | Destabilizing | 0.961 | D | 0.784 | deleterious | None | None | None | None | N |
G/M | 0.9047 | likely_pathogenic | 0.8625 | pathogenic | -0.525 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
G/N | 0.3902 | ambiguous | 0.3231 | benign | -0.688 | Destabilizing | 0.99 | D | 0.693 | prob.delet. | None | None | None | None | N |
G/P | 0.9917 | likely_pathogenic | 0.9854 | pathogenic | -0.456 | Destabilizing | 0.99 | D | 0.787 | deleterious | None | None | None | None | N |
G/Q | 0.6906 | likely_pathogenic | 0.6135 | pathogenic | -0.994 | Destabilizing | 0.99 | D | 0.801 | deleterious | None | None | None | None | N |
G/R | 0.7474 | likely_pathogenic | 0.6811 | pathogenic | -0.555 | Destabilizing | 0.429 | N | 0.384 | neutral | D | 0.667199307 | None | None | N |
G/S | 0.2207 | likely_benign | 0.1934 | benign | -0.82 | Destabilizing | 0.875 | D | 0.66 | prob.neutral | None | None | None | None | N |
G/T | 0.6131 | likely_pathogenic | 0.5346 | ambiguous | -0.913 | Destabilizing | 0.98 | D | 0.758 | deleterious | None | None | None | None | N |
G/V | 0.7725 | likely_pathogenic | 0.6922 | pathogenic | -0.456 | Destabilizing | 0.949 | D | 0.789 | deleterious | D | 0.670502407 | None | None | N |
G/W | 0.8378 | likely_pathogenic | 0.7908 | pathogenic | -1.23 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
G/Y | 0.8378 | likely_pathogenic | 0.786 | pathogenic | -0.904 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.