Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14365 | 43318;43319;43320 | chr2:178633038;178633037;178633036 | chr2:179497765;179497764;179497763 |
N2AB | 12724 | 38395;38396;38397 | chr2:178633038;178633037;178633036 | chr2:179497765;179497764;179497763 |
N2A | 11797 | 35614;35615;35616 | chr2:178633038;178633037;178633036 | chr2:179497765;179497764;179497763 |
N2B | 5300 | 16123;16124;16125 | chr2:178633038;178633037;178633036 | chr2:179497765;179497764;179497763 |
Novex-1 | 5425 | 16498;16499;16500 | chr2:178633038;178633037;178633036 | chr2:179497765;179497764;179497763 |
Novex-2 | 5492 | 16699;16700;16701 | chr2:178633038;178633037;178633036 | chr2:179497765;179497764;179497763 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1302907540 | None | 0.997 | N | 0.757 | 0.416 | 0.276898752692 | gnomAD-4.0.0 | 9.60257E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.05E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3928 | ambiguous | 0.4104 | ambiguous | -0.8 | Destabilizing | 0.997 | D | 0.768 | deleterious | N | 0.518723598 | None | None | N |
E/C | 0.9593 | likely_pathogenic | 0.9675 | pathogenic | -0.46 | Destabilizing | 1.0 | D | 0.652 | prob.neutral | None | None | None | None | N |
E/D | 0.3155 | likely_benign | 0.301 | benign | -1.256 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | N | 0.419482867 | None | None | N |
E/F | 0.9332 | likely_pathogenic | 0.9376 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
E/G | 0.481 | ambiguous | 0.5063 | ambiguous | -1.2 | Destabilizing | 0.999 | D | 0.665 | prob.neutral | N | 0.520589675 | None | None | N |
E/H | 0.6716 | likely_pathogenic | 0.6677 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
E/I | 0.6137 | likely_pathogenic | 0.6342 | pathogenic | 0.3 | Stabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
E/K | 0.1856 | likely_benign | 0.193 | benign | -0.75 | Destabilizing | 0.997 | D | 0.757 | deleterious | N | 0.432052863 | None | None | N |
E/L | 0.7217 | likely_pathogenic | 0.742 | pathogenic | 0.3 | Stabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
E/M | 0.6939 | likely_pathogenic | 0.7123 | pathogenic | 0.789 | Stabilizing | 1.0 | D | 0.663 | prob.neutral | None | None | None | None | N |
E/N | 0.52 | ambiguous | 0.5056 | ambiguous | -1.239 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
E/P | 0.9775 | likely_pathogenic | 0.9846 | pathogenic | -0.045 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
E/Q | 0.1929 | likely_benign | 0.1917 | benign | -1.054 | Destabilizing | 0.999 | D | 0.72 | deleterious | N | 0.433474754 | None | None | N |
E/R | 0.3581 | ambiguous | 0.3655 | ambiguous | -0.506 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
E/S | 0.4377 | ambiguous | 0.4206 | ambiguous | -1.581 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
E/T | 0.4258 | ambiguous | 0.4124 | ambiguous | -1.245 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
E/V | 0.4209 | ambiguous | 0.4421 | ambiguous | -0.045 | Destabilizing | 0.999 | D | 0.665 | prob.neutral | N | 0.477503867 | None | None | N |
E/W | 0.9754 | likely_pathogenic | 0.977 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.65 | prob.neutral | None | None | None | None | N |
E/Y | 0.8724 | likely_pathogenic | 0.877 | pathogenic | 0.016 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.