Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14372 | 43339;43340;43341 | chr2:178633017;178633016;178633015 | chr2:179497744;179497743;179497742 |
N2AB | 12731 | 38416;38417;38418 | chr2:178633017;178633016;178633015 | chr2:179497744;179497743;179497742 |
N2A | 11804 | 35635;35636;35637 | chr2:178633017;178633016;178633015 | chr2:179497744;179497743;179497742 |
N2B | 5307 | 16144;16145;16146 | chr2:178633017;178633016;178633015 | chr2:179497744;179497743;179497742 |
Novex-1 | 5432 | 16519;16520;16521 | chr2:178633017;178633016;178633015 | chr2:179497744;179497743;179497742 |
Novex-2 | 5499 | 16720;16721;16722 | chr2:178633017;178633016;178633015 | chr2:179497744;179497743;179497742 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1240174591 | -1.052 | 0.999 | N | 0.669 | 0.287 | 0.201204373187 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
K/Q | rs1240174591 | -1.052 | 0.999 | N | 0.669 | 0.287 | 0.201204373187 | gnomAD-4.0.0 | 2.73814E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59912E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7868 | likely_pathogenic | 0.7842 | pathogenic | -0.591 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
K/C | 0.8841 | likely_pathogenic | 0.8719 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
K/D | 0.9084 | likely_pathogenic | 0.8974 | pathogenic | -0.63 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
K/E | 0.4608 | ambiguous | 0.4761 | ambiguous | -0.499 | Destabilizing | 0.997 | D | 0.752 | deleterious | N | 0.499091072 | None | None | N |
K/F | 0.9354 | likely_pathogenic | 0.9362 | pathogenic | -0.107 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
K/G | 0.8634 | likely_pathogenic | 0.8531 | pathogenic | -0.999 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
K/H | 0.5242 | ambiguous | 0.4951 | ambiguous | -1.416 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/I | 0.5398 | ambiguous | 0.5822 | pathogenic | 0.486 | Stabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
K/L | 0.6527 | likely_pathogenic | 0.6685 | pathogenic | 0.486 | Stabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
K/M | 0.4204 | ambiguous | 0.4528 | ambiguous | 0.414 | Stabilizing | 1.0 | D | 0.809 | deleterious | N | 0.448638733 | None | None | N |
K/N | 0.6573 | likely_pathogenic | 0.6555 | pathogenic | -0.793 | Destabilizing | 0.999 | D | 0.705 | prob.delet. | N | 0.499933543 | None | None | N |
K/P | 0.9883 | likely_pathogenic | 0.9873 | pathogenic | 0.157 | Stabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
K/Q | 0.2732 | likely_benign | 0.2701 | benign | -0.803 | Destabilizing | 0.999 | D | 0.669 | prob.neutral | N | 0.486604073 | None | None | N |
K/R | 0.1102 | likely_benign | 0.1113 | benign | -0.951 | Destabilizing | 0.997 | D | 0.666 | prob.neutral | N | 0.434838305 | None | None | N |
K/S | 0.7651 | likely_pathogenic | 0.753 | pathogenic | -1.335 | Destabilizing | 0.998 | D | 0.725 | deleterious | None | None | None | None | N |
K/T | 0.3184 | likely_benign | 0.3455 | ambiguous | -0.996 | Destabilizing | 0.999 | D | 0.785 | deleterious | N | 0.412070513 | None | None | N |
K/V | 0.5746 | likely_pathogenic | 0.5975 | pathogenic | 0.157 | Stabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
K/W | 0.9087 | likely_pathogenic | 0.9093 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
K/Y | 0.8223 | likely_pathogenic | 0.8191 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.