Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14389 | 43390;43391;43392 | chr2:178632966;178632965;178632964 | chr2:179497693;179497692;179497691 |
N2AB | 12748 | 38467;38468;38469 | chr2:178632966;178632965;178632964 | chr2:179497693;179497692;179497691 |
N2A | 11821 | 35686;35687;35688 | chr2:178632966;178632965;178632964 | chr2:179497693;179497692;179497691 |
N2B | 5324 | 16195;16196;16197 | chr2:178632966;178632965;178632964 | chr2:179497693;179497692;179497691 |
Novex-1 | 5449 | 16570;16571;16572 | chr2:178632966;178632965;178632964 | chr2:179497693;179497692;179497691 |
Novex-2 | 5516 | 16771;16772;16773 | chr2:178632966;178632965;178632964 | chr2:179497693;179497692;179497691 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.996 | N | 0.755 | 0.249 | 0.295974979623 | gnomAD-4.0.0 | 1.59255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8608E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1064 | likely_benign | 0.1024 | benign | -1.046 | Destabilizing | 0.057 | N | 0.339 | neutral | N | 0.43655841 | None | None | N |
S/C | 0.1568 | likely_benign | 0.1783 | benign | -0.781 | Destabilizing | 0.073 | N | 0.492 | neutral | N | 0.428429499 | None | None | N |
S/D | 0.6331 | likely_pathogenic | 0.6522 | pathogenic | -1.108 | Destabilizing | 0.967 | D | 0.65 | prob.neutral | None | None | None | None | N |
S/E | 0.6265 | likely_pathogenic | 0.623 | pathogenic | -0.928 | Destabilizing | 0.967 | D | 0.638 | neutral | None | None | None | None | N |
S/F | 0.2321 | likely_benign | 0.2324 | benign | -1.002 | Destabilizing | 0.987 | D | 0.659 | prob.neutral | N | 0.508384181 | None | None | N |
S/G | 0.1722 | likely_benign | 0.1646 | benign | -1.421 | Destabilizing | 0.018 | N | 0.337 | neutral | None | None | None | None | N |
S/H | 0.4808 | ambiguous | 0.4865 | ambiguous | -1.646 | Destabilizing | 0.999 | D | 0.66 | prob.neutral | None | None | None | None | N |
S/I | 0.1599 | likely_benign | 0.1645 | benign | -0.093 | Destabilizing | 0.877 | D | 0.647 | neutral | None | None | None | None | N |
S/K | 0.8493 | likely_pathogenic | 0.8479 | pathogenic | -0.11 | Destabilizing | 0.967 | D | 0.64 | neutral | None | None | None | None | N |
S/L | 0.1335 | likely_benign | 0.1312 | benign | -0.093 | Destabilizing | 0.747 | D | 0.596 | neutral | None | None | None | None | N |
S/M | 0.274 | likely_benign | 0.2592 | benign | -0.175 | Destabilizing | 0.99 | D | 0.673 | prob.neutral | None | None | None | None | N |
S/N | 0.2442 | likely_benign | 0.2443 | benign | -0.722 | Destabilizing | 0.967 | D | 0.639 | neutral | None | None | None | None | N |
S/P | 0.9503 | likely_pathogenic | 0.9546 | pathogenic | -0.377 | Destabilizing | 0.996 | D | 0.755 | deleterious | N | 0.510129912 | None | None | N |
S/Q | 0.6614 | likely_pathogenic | 0.6495 | pathogenic | -0.572 | Destabilizing | 0.997 | D | 0.666 | prob.neutral | None | None | None | None | N |
S/R | 0.7289 | likely_pathogenic | 0.7387 | pathogenic | -0.402 | Destabilizing | 0.99 | D | 0.747 | deleterious | None | None | None | None | N |
S/T | 0.09 | likely_benign | 0.0872 | benign | -0.519 | Destabilizing | 0.817 | D | 0.514 | neutral | N | 0.41537228 | None | None | N |
S/V | 0.2042 | likely_benign | 0.2024 | benign | -0.377 | Destabilizing | 0.161 | N | 0.508 | neutral | None | None | None | None | N |
S/W | 0.4647 | ambiguous | 0.4911 | ambiguous | -1.103 | Destabilizing | 0.999 | D | 0.671 | prob.neutral | None | None | None | None | N |
S/Y | 0.2353 | likely_benign | 0.2511 | benign | -0.692 | Destabilizing | 0.996 | D | 0.64 | neutral | N | 0.419612699 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.