Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14420 | 43483;43484;43485 | chr2:178632748;178632747;178632746 | chr2:179497475;179497474;179497473 |
N2AB | 12779 | 38560;38561;38562 | chr2:178632748;178632747;178632746 | chr2:179497475;179497474;179497473 |
N2A | 11852 | 35779;35780;35781 | chr2:178632748;178632747;178632746 | chr2:179497475;179497474;179497473 |
N2B | 5355 | 16288;16289;16290 | chr2:178632748;178632747;178632746 | chr2:179497475;179497474;179497473 |
Novex-1 | 5480 | 16663;16664;16665 | chr2:178632748;178632747;178632746 | chr2:179497475;179497474;179497473 |
Novex-2 | 5547 | 16864;16865;16866 | chr2:178632748;178632747;178632746 | chr2:179497475;179497474;179497473 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.003 | N | 0.238 | 0.339 | 0.12205267543 | gnomAD-4.0.0 | 1.36896E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79929E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7869 | likely_pathogenic | 0.8243 | pathogenic | -0.846 | Destabilizing | 0.742 | D | 0.408 | neutral | None | None | None | None | N |
F/C | 0.7592 | likely_pathogenic | 0.7365 | pathogenic | -0.369 | Destabilizing | 0.994 | D | 0.457 | neutral | N | 0.484957192 | None | None | N |
F/D | 0.9175 | likely_pathogenic | 0.9401 | pathogenic | 0.671 | Stabilizing | 0.984 | D | 0.453 | neutral | None | None | None | None | N |
F/E | 0.9325 | likely_pathogenic | 0.9537 | pathogenic | 0.652 | Stabilizing | 0.953 | D | 0.439 | neutral | None | None | None | None | N |
F/G | 0.9292 | likely_pathogenic | 0.9393 | pathogenic | -1.023 | Destabilizing | 0.854 | D | 0.437 | neutral | None | None | None | None | N |
F/H | 0.7772 | likely_pathogenic | 0.7806 | pathogenic | 0.316 | Stabilizing | 0.91 | D | 0.399 | neutral | None | None | None | None | N |
F/I | 0.5996 | likely_pathogenic | 0.6389 | pathogenic | -0.398 | Destabilizing | 0.521 | D | 0.338 | neutral | N | 0.43888275 | None | None | N |
F/K | 0.9277 | likely_pathogenic | 0.9474 | pathogenic | -0.124 | Destabilizing | 0.953 | D | 0.439 | neutral | None | None | None | None | N |
F/L | 0.9213 | likely_pathogenic | 0.9346 | pathogenic | -0.398 | Destabilizing | 0.003 | N | 0.238 | neutral | N | 0.400520908 | None | None | N |
F/M | 0.7655 | likely_pathogenic | 0.7851 | pathogenic | -0.442 | Destabilizing | 0.91 | D | 0.361 | neutral | None | None | None | None | N |
F/N | 0.8015 | likely_pathogenic | 0.8288 | pathogenic | -0.154 | Destabilizing | 0.984 | D | 0.451 | neutral | None | None | None | None | N |
F/P | 0.971 | likely_pathogenic | 0.9776 | pathogenic | -0.53 | Destabilizing | 0.984 | D | 0.446 | neutral | None | None | None | None | N |
F/Q | 0.9063 | likely_pathogenic | 0.924 | pathogenic | -0.171 | Destabilizing | 0.984 | D | 0.443 | neutral | None | None | None | None | N |
F/R | 0.8482 | likely_pathogenic | 0.8762 | pathogenic | 0.271 | Stabilizing | 0.953 | D | 0.45 | neutral | None | None | None | None | N |
F/S | 0.6555 | likely_pathogenic | 0.6931 | pathogenic | -0.768 | Destabilizing | 0.815 | D | 0.437 | neutral | N | 0.454424959 | None | None | N |
F/T | 0.7557 | likely_pathogenic | 0.7824 | pathogenic | -0.697 | Destabilizing | 0.742 | D | 0.423 | neutral | None | None | None | None | N |
F/V | 0.5828 | likely_pathogenic | 0.6122 | pathogenic | -0.53 | Destabilizing | 0.521 | D | 0.376 | neutral | N | 0.41999239 | None | None | N |
F/W | 0.6381 | likely_pathogenic | 0.6266 | pathogenic | -0.227 | Destabilizing | 0.953 | D | 0.377 | neutral | None | None | None | None | N |
F/Y | 0.255 | likely_benign | 0.2449 | benign | -0.23 | Destabilizing | 0.001 | N | 0.235 | neutral | N | 0.366932183 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.