Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14435 | 43528;43529;43530 | chr2:178632703;178632702;178632701 | chr2:179497430;179497429;179497428 |
N2AB | 12794 | 38605;38606;38607 | chr2:178632703;178632702;178632701 | chr2:179497430;179497429;179497428 |
N2A | 11867 | 35824;35825;35826 | chr2:178632703;178632702;178632701 | chr2:179497430;179497429;179497428 |
N2B | 5370 | 16333;16334;16335 | chr2:178632703;178632702;178632701 | chr2:179497430;179497429;179497428 |
Novex-1 | 5495 | 16708;16709;16710 | chr2:178632703;178632702;178632701 | chr2:179497430;179497429;179497428 |
Novex-2 | 5562 | 16909;16910;16911 | chr2:178632703;178632702;178632701 | chr2:179497430;179497429;179497428 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.37 | D | 0.247 | 0.346 | 0.386558576397 | gnomAD-4.0.0 | 6.84374E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99628E-07 | 0 | 0 |
P/L | rs2059952331 | None | 0.241 | D | 0.315 | 0.484 | 0.491592572028 | gnomAD-4.0.0 | 6.36857E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14397E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.34 | ambiguous | 0.292 | benign | -2.341 | Highly Destabilizing | 0.37 | N | 0.247 | neutral | D | 0.534508082 | None | None | N |
P/C | 0.9475 | likely_pathogenic | 0.9255 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
P/D | 0.9839 | likely_pathogenic | 0.9839 | pathogenic | -3.069 | Highly Destabilizing | 0.998 | D | 0.516 | neutral | None | None | None | None | N |
P/E | 0.9508 | likely_pathogenic | 0.9463 | pathogenic | -2.873 | Highly Destabilizing | 0.998 | D | 0.503 | neutral | None | None | None | None | N |
P/F | 0.9828 | likely_pathogenic | 0.9772 | pathogenic | -1.462 | Destabilizing | 0.995 | D | 0.664 | neutral | None | None | None | None | N |
P/G | 0.8975 | likely_pathogenic | 0.8851 | pathogenic | -2.845 | Highly Destabilizing | 0.967 | D | 0.51 | neutral | None | None | None | None | N |
P/H | 0.9516 | likely_pathogenic | 0.9471 | pathogenic | -2.557 | Highly Destabilizing | 1.0 | D | 0.567 | neutral | D | 0.65848691 | None | None | N |
P/I | 0.8339 | likely_pathogenic | 0.7703 | pathogenic | -0.924 | Destabilizing | 0.99 | D | 0.615 | neutral | None | None | None | None | N |
P/K | 0.9763 | likely_pathogenic | 0.9748 | pathogenic | -2.045 | Highly Destabilizing | 0.995 | D | 0.497 | neutral | None | None | None | None | N |
P/L | 0.6232 | likely_pathogenic | 0.5711 | pathogenic | -0.924 | Destabilizing | 0.241 | N | 0.315 | neutral | D | 0.65848691 | None | None | N |
P/M | 0.8961 | likely_pathogenic | 0.8723 | pathogenic | -0.764 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
P/N | 0.9666 | likely_pathogenic | 0.9641 | pathogenic | -2.259 | Highly Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
P/Q | 0.9195 | likely_pathogenic | 0.9133 | pathogenic | -2.17 | Highly Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
P/R | 0.9438 | likely_pathogenic | 0.9413 | pathogenic | -1.736 | Destabilizing | 0.997 | D | 0.581 | neutral | D | 0.64210868 | None | None | N |
P/S | 0.7875 | likely_pathogenic | 0.7535 | pathogenic | -2.815 | Highly Destabilizing | 0.956 | D | 0.499 | neutral | D | 0.575509291 | None | None | N |
P/T | 0.6414 | likely_pathogenic | 0.6041 | pathogenic | -2.495 | Highly Destabilizing | 0.994 | D | 0.473 | neutral | D | 0.577450217 | None | None | N |
P/V | 0.6913 | likely_pathogenic | 0.6076 | pathogenic | -1.373 | Destabilizing | 0.967 | D | 0.509 | neutral | None | None | None | None | N |
P/W | 0.9946 | likely_pathogenic | 0.993 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
P/Y | 0.9845 | likely_pathogenic | 0.9817 | pathogenic | -1.669 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.