Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14444 | 43555;43556;43557 | chr2:178632676;178632675;178632674 | chr2:179497403;179497402;179497401 |
N2AB | 12803 | 38632;38633;38634 | chr2:178632676;178632675;178632674 | chr2:179497403;179497402;179497401 |
N2A | 11876 | 35851;35852;35853 | chr2:178632676;178632675;178632674 | chr2:179497403;179497402;179497401 |
N2B | 5379 | 16360;16361;16362 | chr2:178632676;178632675;178632674 | chr2:179497403;179497402;179497401 |
Novex-1 | 5504 | 16735;16736;16737 | chr2:178632676;178632675;178632674 | chr2:179497403;179497402;179497401 |
Novex-2 | 5571 | 16936;16937;16938 | chr2:178632676;178632675;178632674 | chr2:179497403;179497402;179497401 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1411904036 | 0.147 | None | N | 0.225 | 0.321 | 0.292423486923 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/N | rs1411904036 | 0.147 | None | N | 0.225 | 0.321 | 0.292423486923 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1256 | likely_benign | 0.1218 | benign | -0.155 | Destabilizing | 0.027 | N | 0.297 | neutral | N | 0.480355552 | None | None | N |
T/C | 0.6968 | likely_pathogenic | 0.6422 | pathogenic | -0.395 | Destabilizing | 0.935 | D | 0.366 | neutral | None | None | None | None | N |
T/D | 0.3897 | ambiguous | 0.3734 | ambiguous | -0.025 | Destabilizing | 0.081 | N | 0.299 | neutral | None | None | None | None | N |
T/E | 0.3419 | ambiguous | 0.3197 | benign | -0.119 | Destabilizing | 0.081 | N | 0.294 | neutral | None | None | None | None | N |
T/F | 0.3616 | ambiguous | 0.3348 | benign | -0.833 | Destabilizing | 0.791 | D | 0.4 | neutral | None | None | None | None | N |
T/G | 0.3194 | likely_benign | 0.2973 | benign | -0.204 | Destabilizing | 0.035 | N | 0.299 | neutral | None | None | None | None | N |
T/H | 0.3456 | ambiguous | 0.3146 | benign | -0.354 | Destabilizing | 0.38 | N | 0.395 | neutral | None | None | None | None | N |
T/I | 0.2879 | likely_benign | 0.2932 | benign | -0.149 | Destabilizing | 0.484 | N | 0.386 | neutral | D | 0.525364136 | None | None | N |
T/K | 0.2149 | likely_benign | 0.2068 | benign | -0.299 | Destabilizing | 0.081 | N | 0.287 | neutral | None | None | None | None | N |
T/L | 0.1632 | likely_benign | 0.1516 | benign | -0.149 | Destabilizing | 0.149 | N | 0.291 | neutral | None | None | None | None | N |
T/M | 0.1201 | likely_benign | 0.1105 | benign | -0.182 | Destabilizing | 0.935 | D | 0.351 | neutral | None | None | None | None | N |
T/N | 0.1173 | likely_benign | 0.1133 | benign | -0.124 | Destabilizing | None | N | 0.225 | neutral | N | 0.443794663 | None | None | N |
T/P | 0.1513 | likely_benign | 0.1378 | benign | -0.128 | Destabilizing | None | N | 0.259 | neutral | N | 0.464898325 | None | None | N |
T/Q | 0.2648 | likely_benign | 0.2389 | benign | -0.324 | Destabilizing | 0.38 | N | 0.384 | neutral | None | None | None | None | N |
T/R | 0.1856 | likely_benign | 0.1654 | benign | -0.014 | Destabilizing | 0.38 | N | 0.378 | neutral | None | None | None | None | N |
T/S | 0.1277 | likely_benign | 0.1209 | benign | -0.278 | Destabilizing | 0.002 | N | 0.129 | neutral | N | 0.37382104 | None | None | N |
T/V | 0.2684 | likely_benign | 0.2659 | benign | -0.128 | Destabilizing | 0.262 | N | 0.244 | neutral | None | None | None | None | N |
T/W | 0.7148 | likely_pathogenic | 0.6705 | pathogenic | -0.93 | Destabilizing | 0.935 | D | 0.508 | neutral | None | None | None | None | N |
T/Y | 0.3907 | ambiguous | 0.3729 | ambiguous | -0.606 | Destabilizing | 0.791 | D | 0.397 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.