Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14461 | 43606;43607;43608 | chr2:178632625;178632624;178632623 | chr2:179497352;179497351;179497350 |
N2AB | 12820 | 38683;38684;38685 | chr2:178632625;178632624;178632623 | chr2:179497352;179497351;179497350 |
N2A | 11893 | 35902;35903;35904 | chr2:178632625;178632624;178632623 | chr2:179497352;179497351;179497350 |
N2B | 5396 | 16411;16412;16413 | chr2:178632625;178632624;178632623 | chr2:179497352;179497351;179497350 |
Novex-1 | 5521 | 16786;16787;16788 | chr2:178632625;178632624;178632623 | chr2:179497352;179497351;179497350 |
Novex-2 | 5588 | 16987;16988;16989 | chr2:178632625;178632624;178632623 | chr2:179497352;179497351;179497350 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.124 | N | 0.458 | 0.092 | 0.210429274316 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85953E-06 | 0 | 0 |
K/R | rs887333870 | None | None | N | 0.11 | 0.167 | 0.0716867268079 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/R | rs887333870 | None | None | N | 0.11 | 0.167 | 0.0716867268079 | gnomAD-4.0.0 | 2.47924E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39093E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3931 | ambiguous | 0.4141 | ambiguous | -0.303 | Destabilizing | 0.272 | N | 0.549 | neutral | None | None | None | None | N |
K/C | 0.6295 | likely_pathogenic | 0.5963 | pathogenic | -0.361 | Destabilizing | 0.968 | D | 0.73 | prob.delet. | None | None | None | None | N |
K/D | 0.7395 | likely_pathogenic | 0.7616 | pathogenic | -0.727 | Destabilizing | 0.567 | D | 0.643 | neutral | None | None | None | None | N |
K/E | 0.2166 | likely_benign | 0.234 | benign | -0.655 | Destabilizing | 0.124 | N | 0.458 | neutral | N | 0.506656739 | None | None | N |
K/F | 0.7356 | likely_pathogenic | 0.7416 | pathogenic | -0.225 | Destabilizing | 0.726 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/G | 0.4429 | ambiguous | 0.4756 | ambiguous | -0.642 | Destabilizing | 0.272 | N | 0.667 | neutral | None | None | None | None | N |
K/H | 0.3154 | likely_benign | 0.3154 | benign | -1.149 | Destabilizing | 0.726 | D | 0.671 | neutral | None | None | None | None | N |
K/I | 0.2712 | likely_benign | 0.2802 | benign | 0.561 | Stabilizing | 0.726 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/L | 0.3545 | ambiguous | 0.3612 | ambiguous | 0.561 | Stabilizing | 0.272 | N | 0.667 | neutral | None | None | None | None | N |
K/M | 0.2351 | likely_benign | 0.2333 | benign | 0.653 | Stabilizing | 0.958 | D | 0.654 | neutral | N | 0.504746739 | None | None | N |
K/N | 0.4936 | ambiguous | 0.5285 | ambiguous | -0.477 | Destabilizing | 0.22 | N | 0.497 | neutral | N | 0.505731355 | None | None | N |
K/P | 0.9201 | likely_pathogenic | 0.9297 | pathogenic | 0.303 | Stabilizing | 0.726 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/Q | 0.138 | likely_benign | 0.1399 | benign | -0.654 | Destabilizing | 0.22 | N | 0.525 | neutral | N | 0.508314478 | None | None | N |
K/R | 0.0568 | likely_benign | 0.0576 | benign | -0.564 | Destabilizing | None | N | 0.11 | neutral | N | 0.445470887 | None | None | N |
K/S | 0.4553 | ambiguous | 0.4722 | ambiguous | -0.945 | Destabilizing | 0.272 | N | 0.444 | neutral | None | None | None | None | N |
K/T | 0.1885 | likely_benign | 0.1927 | benign | -0.693 | Destabilizing | 0.22 | N | 0.625 | neutral | N | 0.48540887 | None | None | N |
K/V | 0.2739 | likely_benign | 0.2788 | benign | 0.303 | Stabilizing | 0.567 | D | 0.674 | neutral | None | None | None | None | N |
K/W | 0.6336 | likely_pathogenic | 0.6193 | pathogenic | -0.197 | Destabilizing | 0.968 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/Y | 0.5968 | likely_pathogenic | 0.5985 | pathogenic | 0.164 | Stabilizing | 0.726 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.