Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14465 | 43618;43619;43620 | chr2:178632613;178632612;178632611 | chr2:179497340;179497339;179497338 |
N2AB | 12824 | 38695;38696;38697 | chr2:178632613;178632612;178632611 | chr2:179497340;179497339;179497338 |
N2A | 11897 | 35914;35915;35916 | chr2:178632613;178632612;178632611 | chr2:179497340;179497339;179497338 |
N2B | 5400 | 16423;16424;16425 | chr2:178632613;178632612;178632611 | chr2:179497340;179497339;179497338 |
Novex-1 | 5525 | 16798;16799;16800 | chr2:178632613;178632612;178632611 | chr2:179497340;179497339;179497338 |
Novex-2 | 5592 | 16999;17000;17001 | chr2:178632613;178632612;178632611 | chr2:179497340;179497339;179497338 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.942 | D | 0.683 | 0.163 | 0.412328234245 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2279 | likely_benign | 0.234 | benign | -2.164 | Highly Destabilizing | 0.822 | D | 0.563 | neutral | D | 0.579939606 | None | None | N |
V/C | 0.7553 | likely_pathogenic | 0.7623 | pathogenic | -1.583 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/D | 0.4076 | ambiguous | 0.4152 | ambiguous | -2.542 | Highly Destabilizing | 0.993 | D | 0.781 | deleterious | None | None | None | None | N |
V/E | 0.3078 | likely_benign | 0.3219 | benign | -2.396 | Highly Destabilizing | 0.99 | D | 0.715 | prob.delet. | N | 0.507134781 | None | None | N |
V/F | 0.1403 | likely_benign | 0.1378 | benign | -1.288 | Destabilizing | 0.956 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/G | 0.2865 | likely_benign | 0.2886 | benign | -2.627 | Highly Destabilizing | 0.971 | D | 0.771 | deleterious | D | 0.622824138 | None | None | N |
V/H | 0.5116 | ambiguous | 0.5124 | ambiguous | -2.175 | Highly Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
V/I | 0.075 | likely_benign | 0.0763 | benign | -0.898 | Destabilizing | 0.019 | N | 0.266 | neutral | None | None | None | None | N |
V/K | 0.3152 | likely_benign | 0.3349 | benign | -1.818 | Destabilizing | 0.978 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/L | 0.158 | likely_benign | 0.1661 | benign | -0.898 | Destabilizing | 0.014 | N | 0.353 | neutral | N | 0.499914249 | None | None | N |
V/M | 0.1432 | likely_benign | 0.1441 | benign | -0.845 | Destabilizing | 0.942 | D | 0.683 | prob.neutral | D | 0.54055012 | None | None | N |
V/N | 0.2932 | likely_benign | 0.2996 | benign | -1.921 | Destabilizing | 0.993 | D | 0.785 | deleterious | None | None | None | None | N |
V/P | 0.9371 | likely_pathogenic | 0.9368 | pathogenic | -1.292 | Destabilizing | 0.993 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/Q | 0.3381 | likely_benign | 0.3516 | ambiguous | -1.899 | Destabilizing | 0.993 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/R | 0.2661 | likely_benign | 0.2756 | benign | -1.428 | Destabilizing | 0.978 | D | 0.786 | deleterious | None | None | None | None | N |
V/S | 0.2696 | likely_benign | 0.281 | benign | -2.527 | Highly Destabilizing | 0.978 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/T | 0.2029 | likely_benign | 0.2126 | benign | -2.262 | Highly Destabilizing | 0.86 | D | 0.615 | neutral | None | None | None | None | N |
V/W | 0.7594 | likely_pathogenic | 0.7493 | pathogenic | -1.705 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
V/Y | 0.4597 | ambiguous | 0.4585 | ambiguous | -1.409 | Destabilizing | 0.978 | D | 0.716 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.