Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14469 | 43630;43631;43632 | chr2:178632601;178632600;178632599 | chr2:179497328;179497327;179497326 |
N2AB | 12828 | 38707;38708;38709 | chr2:178632601;178632600;178632599 | chr2:179497328;179497327;179497326 |
N2A | 11901 | 35926;35927;35928 | chr2:178632601;178632600;178632599 | chr2:179497328;179497327;179497326 |
N2B | 5404 | 16435;16436;16437 | chr2:178632601;178632600;178632599 | chr2:179497328;179497327;179497326 |
Novex-1 | 5529 | 16810;16811;16812 | chr2:178632601;178632600;178632599 | chr2:179497328;179497327;179497326 |
Novex-2 | 5596 | 17011;17012;17013 | chr2:178632601;178632600;178632599 | chr2:179497328;179497327;179497326 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.911 | D | 0.574 | 0.549 | 0.405422107966 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.618 | likely_pathogenic | 0.5635 | ambiguous | -1.536 | Destabilizing | 0.994 | D | 0.748 | deleterious | None | None | None | None | N |
A/D | 0.9569 | likely_pathogenic | 0.9565 | pathogenic | -2.215 | Highly Destabilizing | 0.973 | D | 0.766 | deleterious | D | 0.645343099 | None | None | N |
A/E | 0.9206 | likely_pathogenic | 0.9229 | pathogenic | -2.178 | Highly Destabilizing | 0.979 | D | 0.745 | deleterious | None | None | None | None | N |
A/F | 0.8479 | likely_pathogenic | 0.8467 | pathogenic | -1.157 | Destabilizing | 0.959 | D | 0.778 | deleterious | None | None | None | None | N |
A/G | 0.4154 | ambiguous | 0.3952 | ambiguous | -1.481 | Destabilizing | 0.911 | D | 0.574 | neutral | D | 0.6452355 | None | None | N |
A/H | 0.9665 | likely_pathogenic | 0.9645 | pathogenic | -1.551 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
A/I | 0.3218 | likely_benign | 0.3281 | benign | -0.413 | Destabilizing | 0.535 | D | 0.631 | neutral | None | None | None | None | N |
A/K | 0.9656 | likely_pathogenic | 0.9666 | pathogenic | -1.353 | Destabilizing | 0.979 | D | 0.744 | deleterious | None | None | None | None | N |
A/L | 0.3304 | likely_benign | 0.3069 | benign | -0.413 | Destabilizing | 0.769 | D | 0.521 | neutral | None | None | None | None | N |
A/M | 0.4839 | ambiguous | 0.4648 | ambiguous | -0.519 | Destabilizing | 0.989 | D | 0.766 | deleterious | None | None | None | None | N |
A/N | 0.8691 | likely_pathogenic | 0.8657 | pathogenic | -1.368 | Destabilizing | 0.993 | D | 0.778 | deleterious | None | None | None | None | N |
A/P | 0.6874 | likely_pathogenic | 0.6089 | pathogenic | -0.625 | Destabilizing | 0.991 | D | 0.77 | deleterious | D | 0.549676027 | None | None | N |
A/Q | 0.9223 | likely_pathogenic | 0.9183 | pathogenic | -1.489 | Destabilizing | 0.993 | D | 0.774 | deleterious | None | None | None | None | N |
A/R | 0.9327 | likely_pathogenic | 0.931 | pathogenic | -1.074 | Destabilizing | 0.979 | D | 0.771 | deleterious | None | None | None | None | N |
A/S | 0.2181 | likely_benign | 0.2171 | benign | -1.739 | Destabilizing | 0.834 | D | 0.586 | neutral | N | 0.513060941 | None | None | N |
A/T | 0.1137 | likely_benign | 0.1149 | benign | -1.605 | Destabilizing | 0.716 | D | 0.609 | neutral | D | 0.522805507 | None | None | N |
A/V | 0.0974 | likely_benign | 0.0997 | benign | -0.625 | Destabilizing | 0.016 | N | 0.305 | neutral | N | 0.438632189 | None | None | N |
A/W | 0.9872 | likely_pathogenic | 0.985 | pathogenic | -1.577 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
A/Y | 0.9581 | likely_pathogenic | 0.9552 | pathogenic | -1.151 | Destabilizing | 0.979 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.