Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14480 | 43663;43664;43665 | chr2:178632568;178632567;178632566 | chr2:179497295;179497294;179497293 |
N2AB | 12839 | 38740;38741;38742 | chr2:178632568;178632567;178632566 | chr2:179497295;179497294;179497293 |
N2A | 11912 | 35959;35960;35961 | chr2:178632568;178632567;178632566 | chr2:179497295;179497294;179497293 |
N2B | 5415 | 16468;16469;16470 | chr2:178632568;178632567;178632566 | chr2:179497295;179497294;179497293 |
Novex-1 | 5540 | 16843;16844;16845 | chr2:178632568;178632567;178632566 | chr2:179497295;179497294;179497293 |
Novex-2 | 5607 | 17044;17045;17046 | chr2:178632568;178632567;178632566 | chr2:179497295;179497294;179497293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.707 | 0.405 | 0.508934680445 | gnomAD-4.0.0 | 6.84385E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99624E-07 | 0 | 0 |
E/G | rs1449008181 | -1.594 | 1.0 | D | 0.795 | 0.504 | 0.64458063076 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1449008181 | -1.594 | 1.0 | D | 0.795 | 0.504 | 0.64458063076 | gnomAD-4.0.0 | 2.05315E-06 | None | None | None | None | N | None | 0 | 2.23694E-05 | None | 0 | 0 | None | 0 | 0 | 8.99624E-07 | 0 | 1.65761E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3452 | ambiguous | 0.305 | benign | -1.172 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.510755985 | None | None | N |
E/C | 0.9484 | likely_pathogenic | 0.9311 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/D | 0.669 | likely_pathogenic | 0.5861 | pathogenic | -1.561 | Destabilizing | 0.999 | D | 0.539 | neutral | N | 0.510642928 | None | None | N |
E/F | 0.8924 | likely_pathogenic | 0.8589 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
E/G | 0.6217 | likely_pathogenic | 0.5729 | pathogenic | -1.6 | Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.618071929 | None | None | N |
E/H | 0.7558 | likely_pathogenic | 0.6813 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
E/I | 0.4469 | ambiguous | 0.3974 | ambiguous | 0.037 | Stabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
E/K | 0.2985 | likely_benign | 0.2411 | benign | -1.605 | Destabilizing | 0.999 | D | 0.621 | neutral | N | 0.503151226 | None | None | N |
E/L | 0.6406 | likely_pathogenic | 0.5651 | pathogenic | 0.037 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
E/M | 0.5966 | likely_pathogenic | 0.5261 | ambiguous | 0.739 | Stabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
E/N | 0.8007 | likely_pathogenic | 0.7402 | pathogenic | -1.892 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/P | 0.9937 | likely_pathogenic | 0.9912 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
E/Q | 0.2157 | likely_benign | 0.1896 | benign | -1.587 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.50570175 | None | None | N |
E/R | 0.4658 | ambiguous | 0.3876 | ambiguous | -1.447 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/S | 0.5224 | ambiguous | 0.4659 | ambiguous | -2.469 | Highly Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/T | 0.4882 | ambiguous | 0.4203 | ambiguous | -2.093 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/V | 0.2819 | likely_benign | 0.244 | benign | -0.347 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.468540224 | None | None | N |
E/W | 0.9661 | likely_pathogenic | 0.9497 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/Y | 0.8685 | likely_pathogenic | 0.8242 | pathogenic | -0.632 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.