Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14508 | 43747;43748;43749 | chr2:178632372;178632371;178632370 | chr2:179497099;179497098;179497097 |
N2AB | 12867 | 38824;38825;38826 | chr2:178632372;178632371;178632370 | chr2:179497099;179497098;179497097 |
N2A | 11940 | 36043;36044;36045 | chr2:178632372;178632371;178632370 | chr2:179497099;179497098;179497097 |
N2B | 5443 | 16552;16553;16554 | chr2:178632372;178632371;178632370 | chr2:179497099;179497098;179497097 |
Novex-1 | 5568 | 16927;16928;16929 | chr2:178632372;178632371;178632370 | chr2:179497099;179497098;179497097 |
Novex-2 | 5635 | 17128;17129;17130 | chr2:178632372;178632371;178632370 | chr2:179497099;179497098;179497097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.896 | N | 0.511 | 0.241 | 0.329282125956 | gnomAD-4.0.0 | 6.90055E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04156E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6465 | likely_pathogenic | 0.6723 | pathogenic | -0.915 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
A/D | 0.8801 | likely_pathogenic | 0.8182 | pathogenic | -1.363 | Destabilizing | 0.968 | D | 0.612 | neutral | N | 0.517583581 | None | None | N |
A/E | 0.7019 | likely_pathogenic | 0.6003 | pathogenic | -1.378 | Destabilizing | 0.851 | D | 0.603 | neutral | None | None | None | None | N |
A/F | 0.7225 | likely_pathogenic | 0.7061 | pathogenic | -1.013 | Destabilizing | 0.988 | D | 0.628 | neutral | None | None | None | None | N |
A/G | 0.3489 | ambiguous | 0.2889 | benign | -1.262 | Destabilizing | 0.896 | D | 0.507 | neutral | N | 0.495014961 | None | None | N |
A/H | 0.8594 | likely_pathogenic | 0.8328 | pathogenic | -1.476 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
A/I | 0.4467 | ambiguous | 0.4481 | ambiguous | -0.361 | Destabilizing | 0.851 | D | 0.515 | neutral | None | None | None | None | N |
A/K | 0.6868 | likely_pathogenic | 0.6009 | pathogenic | -1.326 | Destabilizing | 0.034 | N | 0.375 | neutral | None | None | None | None | N |
A/L | 0.414 | ambiguous | 0.4189 | ambiguous | -0.361 | Destabilizing | 0.702 | D | 0.538 | neutral | None | None | None | None | N |
A/M | 0.4774 | ambiguous | 0.4851 | ambiguous | -0.274 | Destabilizing | 0.988 | D | 0.629 | neutral | None | None | None | None | N |
A/N | 0.8163 | likely_pathogenic | 0.7688 | pathogenic | -1.056 | Destabilizing | 0.976 | D | 0.627 | neutral | None | None | None | None | N |
A/P | 0.9642 | likely_pathogenic | 0.9653 | pathogenic | -0.526 | Destabilizing | 0.984 | D | 0.635 | neutral | N | 0.517022115 | None | None | N |
A/Q | 0.6622 | likely_pathogenic | 0.5979 | pathogenic | -1.193 | Destabilizing | 0.976 | D | 0.653 | neutral | None | None | None | None | N |
A/R | 0.6016 | likely_pathogenic | 0.5403 | ambiguous | -0.995 | Destabilizing | 0.952 | D | 0.633 | neutral | None | None | None | None | N |
A/S | 0.2208 | likely_benign | 0.1941 | benign | -1.407 | Destabilizing | 0.896 | D | 0.509 | neutral | N | 0.503532415 | None | None | N |
A/T | 0.1619 | likely_benign | 0.1491 | benign | -1.329 | Destabilizing | 0.896 | D | 0.511 | neutral | N | 0.479972635 | None | None | N |
A/V | 0.172 | likely_benign | 0.1716 | benign | -0.526 | Destabilizing | 0.011 | N | 0.177 | neutral | N | 0.307009083 | None | None | N |
A/W | 0.9654 | likely_pathogenic | 0.959 | pathogenic | -1.404 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
A/Y | 0.8689 | likely_pathogenic | 0.85 | pathogenic | -0.997 | Destabilizing | 0.996 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.