Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14532 | 43819;43820;43821 | chr2:178632300;178632299;178632298 | chr2:179497027;179497026;179497025 |
N2AB | 12891 | 38896;38897;38898 | chr2:178632300;178632299;178632298 | chr2:179497027;179497026;179497025 |
N2A | 11964 | 36115;36116;36117 | chr2:178632300;178632299;178632298 | chr2:179497027;179497026;179497025 |
N2B | 5467 | 16624;16625;16626 | chr2:178632300;178632299;178632298 | chr2:179497027;179497026;179497025 |
Novex-1 | 5592 | 16999;17000;17001 | chr2:178632300;178632299;178632298 | chr2:179497027;179497026;179497025 |
Novex-2 | 5659 | 17200;17201;17202 | chr2:178632300;178632299;178632298 | chr2:179497027;179497026;179497025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 1.0 | D | 0.529 | 0.743 | 0.599259136914 | gnomAD-4.0.0 | 3.20359E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.74713E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8187 | likely_pathogenic | 0.752 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
N/C | 0.895 | likely_pathogenic | 0.8694 | pathogenic | 0.377 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
N/D | 0.3104 | likely_benign | 0.2056 | benign | -0.196 | Destabilizing | 0.999 | D | 0.537 | neutral | D | 0.5450119 | None | None | N |
N/E | 0.8246 | likely_pathogenic | 0.7629 | pathogenic | -0.229 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
N/F | 0.9621 | likely_pathogenic | 0.9523 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
N/G | 0.5984 | likely_pathogenic | 0.5145 | ambiguous | -0.604 | Destabilizing | 0.999 | D | 0.506 | neutral | None | None | None | None | N |
N/H | 0.5112 | ambiguous | 0.4714 | ambiguous | -0.695 | Destabilizing | 1.0 | D | 0.529 | neutral | D | 0.687641953 | None | None | N |
N/I | 0.9079 | likely_pathogenic | 0.8878 | pathogenic | -0.006 | Destabilizing | 1.0 | D | 0.674 | neutral | D | 0.687393843 | None | None | N |
N/K | 0.7801 | likely_pathogenic | 0.7335 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.555 | neutral | D | 0.58840895 | None | None | N |
N/L | 0.854 | likely_pathogenic | 0.8435 | pathogenic | -0.006 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
N/M | 0.8719 | likely_pathogenic | 0.8495 | pathogenic | 0.51 | Stabilizing | 1.0 | D | 0.578 | neutral | None | None | None | None | N |
N/P | 0.988 | likely_pathogenic | 0.981 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
N/Q | 0.8305 | likely_pathogenic | 0.7954 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | N |
N/R | 0.8259 | likely_pathogenic | 0.798 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.564 | neutral | None | None | None | None | N |
N/S | 0.3604 | ambiguous | 0.2966 | benign | -0.199 | Destabilizing | 0.999 | D | 0.512 | neutral | D | 0.689402111 | None | None | N |
N/T | 0.7398 | likely_pathogenic | 0.6647 | pathogenic | -0.092 | Destabilizing | 0.999 | D | 0.554 | neutral | D | 0.688463286 | None | None | N |
N/V | 0.9118 | likely_pathogenic | 0.8908 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
N/W | 0.9809 | likely_pathogenic | 0.9743 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
N/Y | 0.6074 | likely_pathogenic | 0.5816 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.593 | neutral | D | 0.687304674 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.