Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14538 | 43837;43838;43839 | chr2:178632282;178632281;178632280 | chr2:179497009;179497008;179497007 |
N2AB | 12897 | 38914;38915;38916 | chr2:178632282;178632281;178632280 | chr2:179497009;179497008;179497007 |
N2A | 11970 | 36133;36134;36135 | chr2:178632282;178632281;178632280 | chr2:179497009;179497008;179497007 |
N2B | 5473 | 16642;16643;16644 | chr2:178632282;178632281;178632280 | chr2:179497009;179497008;179497007 |
Novex-1 | 5598 | 17017;17018;17019 | chr2:178632282;178632281;178632280 | chr2:179497009;179497008;179497007 |
Novex-2 | 5665 | 17218;17219;17220 | chr2:178632282;178632281;178632280 | chr2:179497009;179497008;179497007 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.78 | N | 0.409 | 0.203 | 0.311387274539 | gnomAD-4.0.0 | 4.80183E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87176E-06 | 0 | 6.07128E-05 |
T/I | None | None | 0.984 | N | 0.419 | 0.451 | 0.488125499135 | gnomAD-4.0.0 | 6.8594E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00836E-07 | 0 | 0 |
T/N | None | None | 0.995 | N | 0.398 | 0.341 | 0.434606191737 | gnomAD-4.0.0 | 6.8594E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00836E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0876 | likely_benign | 0.0828 | benign | -0.32 | Destabilizing | 0.78 | D | 0.409 | neutral | N | 0.493702042 | None | None | N |
T/C | 0.5589 | ambiguous | 0.5279 | ambiguous | -0.231 | Destabilizing | 0.999 | D | 0.46 | neutral | None | None | None | None | N |
T/D | 0.4069 | ambiguous | 0.3786 | ambiguous | 0.101 | Stabilizing | 0.959 | D | 0.409 | neutral | None | None | None | None | N |
T/E | 0.3105 | likely_benign | 0.2835 | benign | 0.019 | Stabilizing | 0.919 | D | 0.413 | neutral | None | None | None | None | N |
T/F | 0.3195 | likely_benign | 0.2969 | benign | -0.862 | Destabilizing | 0.996 | D | 0.52 | neutral | None | None | None | None | N |
T/G | 0.2912 | likely_benign | 0.2663 | benign | -0.436 | Destabilizing | 0.959 | D | 0.482 | neutral | None | None | None | None | N |
T/H | 0.285 | likely_benign | 0.2573 | benign | -0.748 | Destabilizing | 0.999 | D | 0.514 | neutral | None | None | None | None | N |
T/I | 0.2207 | likely_benign | 0.2229 | benign | -0.135 | Destabilizing | 0.984 | D | 0.419 | neutral | N | 0.512068058 | None | None | N |
T/K | 0.1944 | likely_benign | 0.1798 | benign | -0.357 | Destabilizing | 0.919 | D | 0.41 | neutral | None | None | None | None | N |
T/L | 0.1257 | likely_benign | 0.1297 | benign | -0.135 | Destabilizing | 0.959 | D | 0.396 | neutral | None | None | None | None | N |
T/M | 0.1134 | likely_benign | 0.1124 | benign | 0.014 | Stabilizing | 0.999 | D | 0.441 | neutral | None | None | None | None | N |
T/N | 0.1491 | likely_benign | 0.1395 | benign | -0.12 | Destabilizing | 0.995 | D | 0.398 | neutral | N | 0.508330543 | None | None | N |
T/P | 0.0841 | likely_benign | 0.0826 | benign | -0.169 | Destabilizing | 0.004 | N | 0.179 | neutral | N | 0.389350895 | None | None | N |
T/Q | 0.2461 | likely_benign | 0.2238 | benign | -0.347 | Destabilizing | 0.996 | D | 0.429 | neutral | None | None | None | None | N |
T/R | 0.1551 | likely_benign | 0.1428 | benign | -0.091 | Destabilizing | 0.988 | D | 0.422 | neutral | None | None | None | None | N |
T/S | 0.1421 | likely_benign | 0.1323 | benign | -0.302 | Destabilizing | 0.896 | D | 0.46 | neutral | N | 0.501552749 | None | None | N |
T/V | 0.1808 | likely_benign | 0.1798 | benign | -0.169 | Destabilizing | 0.959 | D | 0.392 | neutral | None | None | None | None | N |
T/W | 0.6834 | likely_pathogenic | 0.6502 | pathogenic | -0.893 | Destabilizing | 0.999 | D | 0.588 | neutral | None | None | None | None | N |
T/Y | 0.3596 | ambiguous | 0.3295 | benign | -0.598 | Destabilizing | 0.996 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.