Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14542 | 43849;43850;43851 | chr2:178632270;178632269;178632268 | chr2:179496997;179496996;179496995 |
N2AB | 12901 | 38926;38927;38928 | chr2:178632270;178632269;178632268 | chr2:179496997;179496996;179496995 |
N2A | 11974 | 36145;36146;36147 | chr2:178632270;178632269;178632268 | chr2:179496997;179496996;179496995 |
N2B | 5477 | 16654;16655;16656 | chr2:178632270;178632269;178632268 | chr2:179496997;179496996;179496995 |
Novex-1 | 5602 | 17029;17030;17031 | chr2:178632270;178632269;178632268 | chr2:179496997;179496996;179496995 |
Novex-2 | 5669 | 17230;17231;17232 | chr2:178632270;178632269;178632268 | chr2:179496997;179496996;179496995 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.09 | D | 0.493 | 0.165 | 0.407767136052 | gnomAD-4.0.0 | 1.60164E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.804E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3952 | ambiguous | 0.3218 | benign | -1.92 | Destabilizing | 0.581 | D | 0.515 | neutral | D | 0.634377103 | None | None | N |
V/C | 0.8403 | likely_pathogenic | 0.7931 | pathogenic | -1.776 | Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | N |
V/D | 0.7733 | likely_pathogenic | 0.7064 | pathogenic | -1.853 | Destabilizing | 0.908 | D | 0.827 | deleterious | D | 0.638155472 | None | None | N |
V/E | 0.7134 | likely_pathogenic | 0.6436 | pathogenic | -1.755 | Destabilizing | 0.929 | D | 0.792 | deleterious | None | None | None | None | N |
V/F | 0.2 | likely_benign | 0.1631 | benign | -1.464 | Destabilizing | 0.83 | D | 0.802 | deleterious | N | 0.50785307 | None | None | N |
V/G | 0.5308 | ambiguous | 0.4621 | ambiguous | -2.349 | Highly Destabilizing | 0.908 | D | 0.799 | deleterious | D | 0.635911604 | None | None | N |
V/H | 0.8161 | likely_pathogenic | 0.7552 | pathogenic | -1.94 | Destabilizing | 0.993 | D | 0.814 | deleterious | None | None | None | None | N |
V/I | 0.0757 | likely_benign | 0.0706 | benign | -0.787 | Destabilizing | 0.004 | N | 0.327 | neutral | N | 0.507974249 | None | None | N |
V/K | 0.72 | likely_pathogenic | 0.6517 | pathogenic | -1.482 | Destabilizing | 0.929 | D | 0.795 | deleterious | None | None | None | None | N |
V/L | 0.2884 | likely_benign | 0.2296 | benign | -0.787 | Destabilizing | 0.09 | N | 0.493 | neutral | D | 0.564443643 | None | None | N |
V/M | 0.2299 | likely_benign | 0.2012 | benign | -0.831 | Destabilizing | 0.866 | D | 0.757 | deleterious | None | None | None | None | N |
V/N | 0.6275 | likely_pathogenic | 0.5409 | ambiguous | -1.51 | Destabilizing | 0.976 | D | 0.833 | deleterious | None | None | None | None | N |
V/P | 0.9136 | likely_pathogenic | 0.8879 | pathogenic | -1.132 | Destabilizing | 0.976 | D | 0.812 | deleterious | None | None | None | None | N |
V/Q | 0.7012 | likely_pathogenic | 0.6393 | pathogenic | -1.552 | Destabilizing | 0.976 | D | 0.814 | deleterious | None | None | None | None | N |
V/R | 0.6271 | likely_pathogenic | 0.5544 | ambiguous | -1.135 | Destabilizing | 0.929 | D | 0.832 | deleterious | None | None | None | None | N |
V/S | 0.5223 | ambiguous | 0.447 | ambiguous | -2.195 | Highly Destabilizing | 0.929 | D | 0.782 | deleterious | None | None | None | None | N |
V/T | 0.4017 | ambiguous | 0.3388 | benign | -1.958 | Destabilizing | 0.648 | D | 0.601 | neutral | None | None | None | None | N |
V/W | 0.9021 | likely_pathogenic | 0.8521 | pathogenic | -1.729 | Destabilizing | 0.993 | D | 0.79 | deleterious | None | None | None | None | N |
V/Y | 0.6631 | likely_pathogenic | 0.5686 | pathogenic | -1.395 | Destabilizing | 0.929 | D | 0.81 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.