Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14543 | 43852;43853;43854 | chr2:178632267;178632266;178632265 | chr2:179496994;179496993;179496992 |
N2AB | 12902 | 38929;38930;38931 | chr2:178632267;178632266;178632265 | chr2:179496994;179496993;179496992 |
N2A | 11975 | 36148;36149;36150 | chr2:178632267;178632266;178632265 | chr2:179496994;179496993;179496992 |
N2B | 5478 | 16657;16658;16659 | chr2:178632267;178632266;178632265 | chr2:179496994;179496993;179496992 |
Novex-1 | 5603 | 17032;17033;17034 | chr2:178632267;178632266;178632265 | chr2:179496994;179496993;179496992 |
Novex-2 | 5670 | 17233;17234;17235 | chr2:178632267;178632266;178632265 | chr2:179496994;179496993;179496992 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.052 | N | 0.39 | 0.234 | 0.247322355667 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0939 | likely_benign | 0.0867 | benign | -0.808 | Destabilizing | 0.052 | N | 0.39 | neutral | N | 0.49177538 | None | None | N |
S/C | 0.1334 | likely_benign | 0.1429 | benign | -0.793 | Destabilizing | 0.935 | D | 0.449 | neutral | None | None | None | None | N |
S/D | 0.3353 | likely_benign | 0.31 | benign | -0.993 | Destabilizing | 0.262 | N | 0.399 | neutral | None | None | None | None | N |
S/E | 0.3976 | ambiguous | 0.3715 | ambiguous | -0.98 | Destabilizing | 0.149 | N | 0.37 | neutral | None | None | None | None | N |
S/F | 0.105 | likely_benign | 0.121 | benign | -1.146 | Destabilizing | 0.235 | N | 0.45 | neutral | None | None | None | None | N |
S/G | 0.1428 | likely_benign | 0.1316 | benign | -1.037 | Destabilizing | 0.067 | N | 0.373 | neutral | None | None | None | None | N |
S/H | 0.23 | likely_benign | 0.242 | benign | -1.561 | Destabilizing | 0.001 | N | 0.16 | neutral | None | None | None | None | N |
S/I | 0.1258 | likely_benign | 0.1243 | benign | -0.301 | Destabilizing | 0.081 | N | 0.418 | neutral | None | None | None | None | N |
S/K | 0.5227 | ambiguous | 0.4841 | ambiguous | -0.706 | Destabilizing | 0.149 | N | 0.363 | neutral | None | None | None | None | N |
S/L | 0.0901 | likely_benign | 0.0944 | benign | -0.301 | Destabilizing | None | N | 0.243 | neutral | N | 0.405864265 | None | None | N |
S/M | 0.2079 | likely_benign | 0.211 | benign | 0.038 | Stabilizing | 0.38 | N | 0.463 | neutral | None | None | None | None | N |
S/N | 0.1478 | likely_benign | 0.1352 | benign | -0.843 | Destabilizing | 0.149 | N | 0.374 | neutral | None | None | None | None | N |
S/P | 0.689 | likely_pathogenic | 0.7478 | pathogenic | -0.438 | Destabilizing | 0.741 | D | 0.447 | neutral | N | 0.513518936 | None | None | N |
S/Q | 0.4227 | ambiguous | 0.4039 | ambiguous | -1.078 | Destabilizing | 0.555 | D | 0.451 | neutral | None | None | None | None | N |
S/R | 0.4044 | ambiguous | 0.37 | ambiguous | -0.568 | Destabilizing | 0.38 | N | 0.449 | neutral | None | None | None | None | N |
S/T | 0.0868 | likely_benign | 0.0827 | benign | -0.783 | Destabilizing | 0.211 | N | 0.408 | neutral | N | 0.49237478 | None | None | N |
S/V | 0.161 | likely_benign | 0.1595 | benign | -0.438 | Destabilizing | 0.081 | N | 0.419 | neutral | None | None | None | None | N |
S/W | 0.1335 | likely_benign | 0.2123 | benign | -1.134 | Destabilizing | 0.001 | N | 0.386 | neutral | None | None | None | None | N |
S/Y | 0.1056 | likely_benign | 0.1163 | benign | -0.821 | Destabilizing | 0.081 | N | 0.419 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.