Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14550 | 43873;43874;43875 | chr2:178632246;178632245;178632244 | chr2:179496973;179496972;179496971 |
N2AB | 12909 | 38950;38951;38952 | chr2:178632246;178632245;178632244 | chr2:179496973;179496972;179496971 |
N2A | 11982 | 36169;36170;36171 | chr2:178632246;178632245;178632244 | chr2:179496973;179496972;179496971 |
N2B | 5485 | 16678;16679;16680 | chr2:178632246;178632245;178632244 | chr2:179496973;179496972;179496971 |
Novex-1 | 5610 | 17053;17054;17055 | chr2:178632246;178632245;178632244 | chr2:179496973;179496972;179496971 |
Novex-2 | 5677 | 17254;17255;17256 | chr2:178632246;178632245;178632244 | chr2:179496973;179496972;179496971 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs2059896873 | None | 0.568 | N | 0.585 | 0.301 | 0.373537453441 | gnomAD-4.0.0 | 6.86621E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01448E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.108 | likely_benign | 0.0992 | benign | -0.636 | Destabilizing | 0.037 | N | 0.299 | neutral | N | 0.495398812 | None | None | N |
T/C | 0.4247 | ambiguous | 0.4159 | ambiguous | -0.507 | Destabilizing | 0.859 | D | 0.519 | neutral | None | None | None | None | N |
T/D | 0.4272 | ambiguous | 0.3886 | ambiguous | -1.28 | Destabilizing | 0.364 | N | 0.519 | neutral | None | None | None | None | N |
T/E | 0.2713 | likely_benign | 0.2335 | benign | -1.254 | Destabilizing | 0.22 | N | 0.499 | neutral | None | None | None | None | N |
T/F | 0.1332 | likely_benign | 0.1222 | benign | -0.682 | Destabilizing | None | N | 0.258 | neutral | None | None | None | None | N |
T/G | 0.3401 | ambiguous | 0.3031 | benign | -0.918 | Destabilizing | 0.364 | N | 0.521 | neutral | None | None | None | None | N |
T/H | 0.2113 | likely_benign | 0.1854 | benign | -1.326 | Destabilizing | 0.859 | D | 0.578 | neutral | None | None | None | None | N |
T/I | 0.0659 | likely_benign | 0.0648 | benign | 0.033 | Stabilizing | None | N | 0.177 | neutral | N | 0.447556671 | None | None | N |
T/K | 0.1342 | likely_benign | 0.1116 | benign | -0.862 | Destabilizing | 0.004 | N | 0.199 | neutral | None | None | None | None | N |
T/L | 0.0751 | likely_benign | 0.0703 | benign | 0.033 | Stabilizing | 0.004 | N | 0.328 | neutral | None | None | None | None | N |
T/M | 0.0767 | likely_benign | 0.0702 | benign | 0.407 | Stabilizing | 0.497 | N | 0.548 | neutral | None | None | None | None | N |
T/N | 0.1195 | likely_benign | 0.1051 | benign | -1.023 | Destabilizing | 0.301 | N | 0.446 | neutral | N | 0.500388029 | None | None | N |
T/P | 0.4625 | ambiguous | 0.4354 | ambiguous | -0.157 | Destabilizing | 0.568 | D | 0.585 | neutral | N | 0.515160847 | None | None | N |
T/Q | 0.1978 | likely_benign | 0.1698 | benign | -1.206 | Destabilizing | 0.497 | N | 0.577 | neutral | None | None | None | None | N |
T/R | 0.1041 | likely_benign | 0.0885 | benign | -0.631 | Destabilizing | 0.124 | N | 0.562 | neutral | None | None | None | None | N |
T/S | 0.1416 | likely_benign | 0.1275 | benign | -1.103 | Destabilizing | 0.081 | N | 0.371 | neutral | N | 0.484623344 | None | None | N |
T/V | 0.0949 | likely_benign | 0.0895 | benign | -0.157 | Destabilizing | 0.001 | N | 0.105 | neutral | None | None | None | None | N |
T/W | 0.4443 | ambiguous | 0.3974 | ambiguous | -0.734 | Destabilizing | 0.958 | D | 0.554 | neutral | None | None | None | None | N |
T/Y | 0.1918 | likely_benign | 0.1765 | benign | -0.439 | Destabilizing | 0.124 | N | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.